Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04373 ATGGCGCTGCAATACGGAGCAGAAGGAGTGGTAGAATGCCGCCAAAGTAGAGGCATAGATCGGTTCCTGGCCGAGTTGAGGTACACCAGACGGGAGGCAATAGACGACATGGGGCAACCGTCGACACCATTCAAGAAAGAGAAATCTGTTCCATTAAGAGTTTCGGCAGAGTCAACAATGCAGCCAACTAATGCACTGAATTATGCAAATGCATATACTGCGCTTAACGTCAAGAGAACAAAACCTCAAGAACCATTTGACAGAATGCTACTCGAGGGAGTTGGTAGTTCTAAAGACTTGAGAAATTTGTGCCCTTTGGCTCCCAAGCAATGCATGATGGATACTACCCTTAATAGCAACAACACTATGATACCTTTTGCACCTAAGAAAGAGATGAAGAATGTGACAATTAAGGCAACATATAAAGAAGATATCGTAAGGTTTAGGGTGTCTTTGAACTGTGGCATTGTTGCACTGCAGGAAGAAATTTCAAAGAGATTGAAACTAGAAATTGGAGCATTTGTTATAAAGTATCTGGACGATGATAATGAATGGGTTTTGATATCATGTGATGCAGATCTTCATGAGTGCATGGATGTTTTAACTTCATCAGGAAGCAACATGATAAGGCTTGTTGTGCATGACATAGTTTCCATTCTTGGAAGCTCTTGTGAGAGCTCTGGAACTGAGGATAAATAA 699 0.4163 MALQYGAEGVVECRQSRGIDRFLAELRYTRREAIDDMGQPSTPFKKEKSVPLRVSAESTMQPTNALNYANAYTALNVKRTKPQEPFDRMLLEGVGSSKDLRNLCPLAPKQCMMDTTLNSNNTMIPFAPKKEMKNVTIKATYKEDIVRFRVSLNCGIVALQEEISKRLKLEIGAFVIKYLDDDNEWVLISCDADLHECMDVLTSSGSNMIRLVVHDIVSILGSSCESSGTEDK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04373 232 Pfam PB1 domain 135 215 IPR000270 GO:0005515
Adu03g04373 232 Gene3D - 131 215 - -
Adu03g04373 232 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 46 229 - -
Adu03g04373 232 ProSiteProfiles PB1 domain profile. 134 216 IPR000270 GO:0005515
Adu03g04373 232 SUPERFAMILY CAD & PB1 domains 133 219 - -
Adu03g04373 232 PANTHER PROTEIN NLP8 46 229 IPR045012 GO:0003700
Adu03g04373 232 SMART PB1_new 134 216 IPR000270 GO:0005515
Adu03g04373 232 CDD PB1_NLP 135 215 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04373 Adu-Chr3 132705161 132706761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04373 86 228 NLP Transcription Factor Family AT4G24020 50.932 1.92e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04373 - - var:108346096 219.935