Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04325 ATGATTCCCTTCACTTGTGTGTGCACTGTGCACCATCCTCATAAACAATGGCCAACCTATGGAGTTTTCTCCGATAAATTAGGTTTGAATAACGGGAAGCGTGTTTATGGGCTATGGCTTCCAGCACAGCAGACACTGACAGCTCGGCTAAACCGCACCACTGAACACGAAGAAGAAAAAGGGAGGGCGATGGCGGGAAGGGCTAAACGGAAAACCTCTGCTTCTGCTTCACCCTCTTCTTCTGTTCCTTCCCGCAAACTAGTGTTGAACATCAAAACAAGCAGGGGGATGAAGAGATCACTGCGGCAGGCTAATTCGAGAAAGAAACCCAAAGCAAAACAAAAGATTGATGCTAAGAAGCCAAAGAAACCTCCCACTGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAACCCCGATGTCAAGTCAATGCGAGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACGATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAGAAAAGCGCGCAGAATTTGATATGGCAATGGCAGAATATAATAAGAAAATGGAAAACGGTGAATTTGAAGACACTGATGAAGAATCGGATTTTGATGAATAA 630 0.4365 MIPFTCVCTVHHPHKQWPTYGVFSDKLGLNNGKRVYGLWLPAQQTLTARLNRTTEHEEEKGRAMAGRAKRKTSASASPSSSVPSRKLVLNIKTSRGMKRSLRQANSRKKPKAKQKIDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDMAMAEYNKKMENGEFEDTDEESDFDE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04325 209 MobiDBLite consensus disorder prediction 72 88 - -
Adu03g04325 209 MobiDBLite consensus disorder prediction 51 122 - -
Adu03g04325 209 Pfam HMG (high mobility group) box 121 190 IPR009071 -
Adu03g04325 209 Gene3D High mobility group box domain 104 205 IPR036910 -
Adu03g04325 209 SUPERFAMILY HMG-box 108 198 IPR036910 -
Adu03g04325 209 MobiDBLite consensus disorder prediction 101 118 - -
Adu03g04325 209 MobiDBLite consensus disorder prediction 51 66 - -
Adu03g04325 209 SMART hmgende2 120 191 IPR009071 -
Adu03g04325 209 CDD HMGB-UBF_HMG-box 121 187 - -
Adu03g04325 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 67 208 - -
Adu03g04325 209 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 67 208 - -
Adu03g04325 209 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 121 190 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04325 Adu-Chr3 132194244 132197936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Adu03g04325 HMG_box 8.7e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04325 - - gmx:100809401 180.644