Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04313 ATGCTAAGTCAAGGAGAAGAAACGGAGGGAGTAACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCAGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCAGCACAGCTTCAATTTCCTGATTCCATGCCCATATCAGAGAAGAAGGAAAGAGCTGATGTAACTATCAGGGAAATGGGTCTGCAAAACGCCATTAACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCGGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAAATGTATATTTTGGTCCTGCTTCTGATGCTAATCAGCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGGTCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGTTAGTATCCTTGTGAAGTCTTATAGCTTGTCTCAGATTAAGAACAAAGTTTATACAGAAGTGGCAAACATAAATCAACGTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTACTGTGTTTATTGCTATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGCTCCGGGACTAATATCCTATTACCTTTGTGGACTGCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTTTGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCTTATGGAAATACCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTCAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGCTAAGAATAACATAAACATTAGTGGTGGGGAAATTCTAATAAAGACATGGCACGTGGAAATGGGACATTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGTGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1869 0.4109 MLSQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPISEKKERADVTIREMGLQNAINTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGENVYFGPASDANQQFFALNGFPCPTLHNPSDHYLRVINKDFEQEAEEGFGSRVTAEKAVSILVKSYSLSQIKNKVYTEVANINQRDFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLTVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLAPGLISYYLCGLQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNFVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFQGLTFMMGQDGGAKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKVKLRPASICCFH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04313 622 CDD ABCG_EPDR 10 240 - -
Adu03g04313 622 SMART AAA_5 41 234 IPR003593 -
Adu03g04313 622 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
Adu03g04313 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Adu03g04313 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 615 - -
Adu03g04313 622 Pfam ABC-2 type transporter 215 284 IPR043926 GO:0140359
Adu03g04313 622 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 5 615 - -
Adu03g04313 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 248 IPR027417 -
Adu03g04313 622 Pfam ABC-2 type transporter 336 548 IPR013525 GO:0016020|GO:0140359
Adu03g04313 622 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Adu03g04313 622 Gene3D - 11 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04313 Adu-Chr3 132113072 132115939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04313 5 219 Calmodulin-binding Proteins AT2G36910 28.139 4.46e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04313 K05681 - gmx:100792425 927.161