Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04291 ATGAGCCTCATTGTTAGTGGAACCAACTTCACTACTAGAGATAAGCATGCACTTGTTGCTCTCAAATCTTCCATAACTCAGGACCCTCACCACTTCCTCACACATAATTGGTCCACCAACTTCTCAGTATGCAACTGGTTTGGTGTCACCTGTGATCATCGCCATGGAAGGGTAAGAACCTTGAATCTTGGTGACATGGGTCTTAGTGGTACCATACCCTCTCATTTGGGGAACCTCTCCTTCCTCATTGAACTCAACCTTGGTGGTAACACTTTCCATCACAACTTGCCACAAGAACTAGTTCATCTTCGAAGATTGAAGTCACTTAACTTGAGCTACAATGAATTTAGTGGCAATGTTCCACAATGGATAGGAGCCTTATCTTCTCTTCAACACTTGAACCTTAAAAACAATAGGTTTGGTGGTGTTATTCCAAAGTCTATATCAAATTTAACAGTGCTAGAGACCTTGGAAATTGGCCACAATCTTATTGAAGGCTCCATTCCATATGAAGTTGGCAGAATGAGCCAATTGAGGATCTTATCCATGTCAGTAAACCATCTCTCCGGACCTCTCTTCTTTGCGTGGAATCAGAACCACATTCCATTGTTAGGAGGCATTCCAGTGGAGATTGGTGAACTTCCGGAGCTAAGAGTGGTGTATCTTGGAAATAATCCACTTGGTGGATCCATACCAACAACAATGTTGAATAGTTCAACGCTGCAAGACATTGAGATTGGGTCAAGCAACTTATCTGGGACCCTACCATCAAACTTATGTGGTGGACTTGCAAGAATCCAAGTGCTTTACATAGCTTTCAACCTGCTTTCTGGTAAACTGCCTTCGGTTTGGCACCACTGCAAAGAGTTGACCGATGTTGACTTATCAAACAACAAGTTCAGCCAAGGGAACATACCCCGTGATATTGGAAACTTAACTATGCTTGCTTCCTTGTATCTTAATCAAGCCAACTTACAAGGAGAAATTCCACCCTCTCTTTTTAACATATCTTCAATGAGAGTACTCAACCTTGGACAAAACAAATTGAATGGTAGCCTCACAGAAGAGATGTTTCTTCAGCTTCCTTTACTAGAATACATTTATCTGGTAGATAATCAATTTGTTGGAAGTATTCCAAAAACAATAAGCAACTGCACCATGCTCCAAGAGTTACATTTGGGAAGCAACTACTTCACAGGTTCTATACCAGAGGGCATTGGAGATCTTCTACTCACAAGCTTAAGCATGGGAAATAACCATTTAAGTGGATCAATTCCCTCAAATATCTTCAACATGTCTTCACTGAGTTACTTATATCTAGCAAATAATTCCCTCTCAGGTTCTCTTCCATCACATATCAGCCTTGAAAACATGGAAGAGCTAAACTTGTATGGAAACAAACTTAGTGGAAATATTCCAAGTAGCATATCCAATGCTACAAAGCTTAACTACATGGACTTGAAGTTAAATAAATTCAGTGGAGTTATCCCAAATACTATTGGGAATTTGAGAAATCTTCAGCAGCTTGATTTAGGATACAATAATTTAACCACTCATTCTTCCACTCTTGAATTAATGTATCCTTCTTCCTTGTGCGATCTTTACATATCAGGGAATCCATTCCATGCAAAGCTTCCCAAGTCAATAGGAAATATGTCCAATTTGGAACTATTTGATGCTGATGCTTGCAGTATTGATGGTGAAATCCCTTTGGAAATTGGAAACTTAACCAATTTGTACGCGCTAAGTTTGTACCAGAATGATTTAAGTGGAACCATTCCAACTACAATTAAAGGTTTGCAGTCTCTTCAATATTTGAATCTTGGCAACAACCGTCTGCAGGGAACCATCATCAGCGAAATCTGCAAAATCAAGCAGCTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTCTGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAACTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGTGGTGAACTTGTCTGACAATGCTTTAACTCTATCTCTTCCAATTGAAATTGGGAACTTAAAGGCTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGTGGTATTCCTGATTCACTTGGCAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCATTGGAGTCACTTCATTATCTTGAATTCATCAATCTTTCTCATAATAGTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCGAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAGTAAAGAAGAAAGGGTCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTGGTTGTTTTCTGTGTGTTTTTTCTCGTCAGGCGTCGAAGAAAGAATGGTGGTGATACTAACGAAGGAACATTATCAGCATTACCAGCAGCCAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATCAAGATCATAGATTGTTGTTCAAGTATAGATTACAAGCTTTTAATGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGCCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGAGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTACCCCATGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCATTGAACAAAGTTAAGGCCATGTTTCTTAAAGCTAGTGACAAGGATGTCGTGCGGTTTTGTAGAAAATGA 3549 0.3934 MSLIVSGTNFTTRDKHALVALKSSITQDPHHFLTHNWSTNFSVCNWFGVTCDHRHGRVRTLNLGDMGLSGTIPSHLGNLSFLIELNLGGNTFHHNLPQELVHLRRLKSLNLSYNEFSGNVPQWIGALSSLQHLNLKNNRFGGVIPKSISNLTVLETLEIGHNLIEGSIPYEVGRMSQLRILSMSVNHLSGPLFFAWNQNHIPLLGGIPVEIGELPELRVVYLGNNPLGGSIPTTMLNSSTLQDIEIGSSNLSGTLPSNLCGGLARIQVLYIAFNLLSGKLPSVWHHCKELTDVDLSNNKFSQGNIPRDIGNLTMLASLYLNQANLQGEIPPSLFNISSMRVLNLGQNKLNGSLTEEMFLQLPLLEYIYLVDNQFVGSIPKTISNCTMLQELHLGSNYFTGSIPEGIGDLLLTSLSMGNNHLSGSIPSNIFNMSSLSYLYLANNSLSGSLPSHISLENMEELNLYGNKLSGNIPSSISNATKLNYMDLKLNKFSGVIPNTIGNLRNLQQLDLGYNNLTTHSSTLELMYPSSLCDLYISGNPFHAKLPKSIGNMSNLELFDADACSIDGEIPLEIGNLTNLYALSLYQNDLSGTIPTTIKGLQSLQYLNLGNNRLQGTIISEICKIKQLSELYITENKLISGEVPTCFGNLTSLRKLYLNSNKLSKVPSSLWSLRDILVVNLSDNALTLSLPIEIGNLKAVTFLDLSKNMISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNLFGLIPRSLESLHYLEFINLSHNSLEGEIPSGGPFENFTAQSFMFNKALCGNARLQVPACSKVKKKGSNANIFFIKCILPIMVSIILVVFCVFFLVRRRRKNGGDTNEGTLSALPAARMISYYELSQATNGFDESNLLGRGSFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECEAMRNLRHRNLIKIIDCCSSIDYKLLMMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVAHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLPHAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMTDIAASLNKVKAMFLKASDKDVVRFCRK 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04291 1182 Gene3D Ribonuclease Inhibitor 13 126 IPR032675 -
Adu03g04291 1182 SMART serkin_6 888 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04291 1182 SUPERFAMILY Protein kinase-like (PK-like) 869 1161 IPR011009 -
Adu03g04291 1182 SUPERFAMILY L domain-like 203 325 - -
Adu03g04291 1182 Pfam Leucine Rich Repeat 746 768 IPR001611 GO:0005515
Adu03g04291 1182 SUPERFAMILY RNI-like 413 787 - -
Adu03g04291 1182 ProSiteProfiles Leucine-rich repeat profile. 505 526 IPR001611 GO:0005515
Adu03g04291 1182 Gene3D Ribonuclease Inhibitor 361 523 IPR032675 -
Adu03g04291 1182 Gene3D Ribonuclease Inhibitor 199 360 IPR032675 -
Adu03g04291 1182 Pfam Leucine rich repeat N-terminal domain 14 52 IPR013210 -
Adu03g04291 1182 SMART LRR_typ_2 696 719 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 361 385 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 720 743 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 649 672 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 503 526 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 455 479 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 336 360 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 127 151 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 411 432 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 600 624 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 744 767 IPR003591 -
Adu03g04291 1182 SMART LRR_typ_2 214 238 IPR003591 -
Adu03g04291 1182 ProSiteProfiles Protein kinase domain profile. 888 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04291 1182 Pfam Protein kinase domain 889 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04291 1182 Gene3D Transferase(Phosphotransferase) domain 1 964 1178 - -
Adu03g04291 1182 ProSiteProfiles Leucine-rich repeat profile. 651 672 IPR001611 GO:0005515
Adu03g04291 1182 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Adu03g04291 1182 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Adu03g04291 1182 Pfam Leucine rich repeat 695 733 IPR001611 GO:0005515
Adu03g04291 1182 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Adu03g04291 1182 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Adu03g04291 1182 ProSitePatterns Protein kinases ATP-binding region signature. 894 916 IPR017441 GO:0005524
Adu03g04291 1182 SUPERFAMILY L domain-like 24 539 - -
Adu03g04291 1182 Gene3D Ribonuclease Inhibitor 127 198 IPR032675 -
Adu03g04291 1182 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 264 518 - -
Adu03g04291 1182 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 146 - -
Adu03g04291 1182 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 142 355 - -
Adu03g04291 1182 Gene3D Ribonuclease Inhibitor 524 824 IPR032675 -
Adu03g04291 1182 Gene3D Phosphorylase Kinase; domain 1 870 963 - -
Adu03g04291 1182 PANTHER - 333 1168 - -
Adu03g04291 1182 PANTHER - 264 518 - -
Adu03g04291 1182 PANTHER - 9 146 - -
Adu03g04291 1182 PANTHER - 142 355 - -
Adu03g04291 1182 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 333 1168 - -
Adu03g04291 1182 SMART LRR_sd22_2 503 525 - -
Adu03g04291 1182 SMART LRR_sd22_2 576 602 - -
Adu03g04291 1182 SMART LRR_sd22_2 744 770 - -
Adu03g04291 1182 SMART LRR_sd22_2 696 722 - -
Adu03g04291 1182 SMART LRR_sd22_2 649 671 - -
Adu03g04291 1182 SMART LRR_sd22_2 455 481 - -
Adu03g04291 1182 SMART LRR_sd22_2 151 172 - -
Adu03g04291 1182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04291 Adu-Chr3 131901067 131906407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04291 665 787 Receptor kinase-like Gene Family AT3G47570 39.024 1.08e-15 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu03g04291 Pkinase 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04291 - K13420 gmx:100784397 1646.33