Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04231 ATGGTGGGAAGTGTTGATGTTTGGGGTACTGTTGATTCAAGCATGAATGGAGCAGGTGTAGGGGGATGTTTGATCAAAGAACTAGTCCATCATCATGGCGAAAGGGAGAAGATAGTTCCGGGAAGAGATATGCATACGGTGTCGTTTGAAATCACTGAACCAGATCTGGATGATGAGGTTACAGGAGAAAGAGAAGCTTTTATGGCTAGTGTTTTATCCAAGTACAAAAAATCCCTCACAGAAAAAACCAAGTTCCATCTAGGCTATCCGTACAATCTGGATTTCGACTACGATGCGCTGTGTCAGCTTCAGCACTTCTCCATAAACAACCTGGGGGATCCGTTTATCGAGAGCAACTACGGGGTGCACTCGAGGCAGTTCGAGGTTGGTGTTTTGGACTGGTTTGCAAGGTTGTGGGAACTTGACAAGAACCAGTACTGGGGATACATAACAAACTGTGGCACAGAAGGGAATCTCCATGGAATCCTTGTTGGCAGAGAGGTGTTCCCAGATGGAATCTTGTATGCCTCTCGCGAGATTGATTGCCATGATTTTAAGTCCAAGCTTCTTTCTAACAAGGATAAGCCTGCCATTGTTAATGTTAACATAGGTACAACTGTCAAAGGAGCTGTTGATGATCTTGATTTGGTTATTAACAAGCTTCAGGAAGCAGGATTCTCCCATGACAGATTCTATATCCATTGTGATGGGGCTTTGTTTGGTCTCATGTTACCTTTCGTCAAACGAGCTCCGAAAGTGAGTTTCAAGAAGGCAATTGGAAGCGTGAGTGTGTCAGGGCACAAATTCTTTGGGTGTCCAATGCCATGTGGGGTGCTGATAACAAGATTGGAACACGTGAAGGTGCTGTCAAGGAACGTAGAGTACCTTGCCTCGAGAGATGCAACAATCATGGGTAGCCGTAACGGCCACGCGCCACTCTTCCTATGGTACACTCTAAACAGAAAAGGATACAGGGGATTCCGGAAAGAGGTTCAGAAATGCTTGAGGAACGCACACTACTTCAAGGACCGCCTCGTCCACGCGGGGATCGGAGCAATGCTGAACGAGCTCAGCAGCACCGTCGTGTTTGAGCGCCCTCACGACGAGGAGTTCGTGCGCAAGTGGCAGTTGGCGTGCCAGGGGAACATAGCACATGTTGTGGTCATGCCAAATGTCACCATACACAAGCTGGATGGTTTTCTTGACGAGCTTGTGCAAAAGCGTGATGCATGGTTCGGAGAAGGGAAATCTCAGCCTCCTTGTATAGCTTCTGATGTTGGCATACATAATTGCCTTTGTGCTTTGCATAGGTGA 1314 0.4718 MVGSVDVWGTVDSSMNGAGVGGCLIKELVHHHGEREKIVPGRDMHTVSFEITEPDLDDEVTGEREAFMASVLSKYKKSLTEKTKFHLGYPYNLDFDYDALCQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELDKNQYWGYITNCGTEGNLHGILVGREVFPDGILYASREIDCHDFKSKLLSNKDKPAIVNVNIGTTVKGAVDDLDLVINKLQEAGFSHDRFYIHCDGALFGLMLPFVKRAPKVSFKKAIGSVSVSGHKFFGCPMPCGVLITRLEHVKVLSRNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYRGFRKEVQKCLRNAHYFKDRLVHAGIGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTIHKLDGFLDELVQKRDAWFGEGKSQPPCIASDVGIHNCLCALHR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04231 437 PANTHER - 177 437 - -
Adu03g04231 437 PANTHER - 30 179 - -
Adu03g04231 437 PANTHER SERINE DECARBOXYLASE 177 437 - -
Adu03g04231 437 PANTHER SERINE DECARBOXYLASE 30 179 - -
Adu03g04231 437 SUPERFAMILY PLP-dependent transferases 70 409 IPR015424 -
Adu03g04231 437 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 261 282 IPR021115 GO:0016831
Adu03g04231 437 Gene3D - 103 176 IPR015421 GO:0003824
Adu03g04231 437 Gene3D - 177 319 IPR015421 GO:0003824
Adu03g04231 437 Pfam Pyridoxal-dependent decarboxylase conserved domain 184 356 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu03g04231 437 Gene3D Aspartate Aminotransferase, domain 1 320 409 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04231 Adu-Chr3 131317500 131319277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04231 203 343 Calmodulin-binding Proteins AT1G65960 25.333 9.59e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04231 K25193 - gmx:100792053 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04231 03 131317500 131319277 Adu10g00570 10 6494596 6498077 PCT