Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g04208 | ATGGATGCTTTGTTGTTGAGCTCATTTCAGTGCCTTCCATGGCTCTCATCAACCAAGCAGCAAAGGCACTATTCTCATATGCATCTTTCATGCAGAGCCACAAAGGTGGAGTGTGAGAGCAACTTCTACAAGGTTCTGAGTGTTAGTCCAAAGAGTGCAACCATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCTAATAGGATGTTTGTGCAGTTGAATGCTGCTTATGAGACCTTGTCCAACCCCATGCTTAGACAACAGTATGATAGTCAATTAGGTTTGAGTGTCAGCCATGATTATTCTGAAACTAGTTTGAGGAGCCTTTGGGAGGAGGAGCAACACCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAGCAAAAGGCCAACAGAATGAGGGCACCAACCAGAAGAAAAGACAGGAACTGA | 492 | 0.4553 | MDALLLSSFQCLPWLSSTKQQRHYSHMHLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLRQQYDSQLGLSVSHDYSETSLRSLWEEEQHQVVVELKTRSRRRMEQKANRMRAPTRRKDRN | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g04208 | 163 | ProSiteProfiles | dnaJ domain profile. | 41 | 110 | IPR001623 | - | |
Adu03g04208 | 163 | Gene3D | DnaJ domain | 26 | 137 | IPR036869 | - | |
Adu03g04208 | 163 | CDD | DnaJ | 41 | 99 | IPR001623 | - | |
Adu03g04208 | 163 | SUPERFAMILY | Chaperone J-domain | 28 | 106 | IPR036869 | - | |
Adu03g04208 | 163 | Pfam | DnaJ domain | 41 | 107 | IPR001623 | - | |
Adu03g04208 | 163 | ProSitePatterns | Nt-dnaJ domain signature. | 87 | 106 | IPR018253 | - | |
Adu03g04208 | 163 | MobiDBLite | consensus disorder prediction | 141 | 163 | - | - | |
Adu03g04208 | 163 | PANTHER | CHAPERONE DNAJ DOMAIN PROTEIN | 18 | 161 | - | - | |
Adu03g04208 | 163 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 18 | 161 | - | - | |
Adu03g04208 | 163 | SMART | dnaj_3 | 40 | 102 | IPR001623 | - | |
Adu03g04208 | 163 | PRINTS | DnaJ domain signature | 44 | 62 | IPR001623 | - | |
Adu03g04208 | 163 | PRINTS | DnaJ domain signature | 62 | 77 | IPR001623 | - | |
Adu03g04208 | 163 | PRINTS | DnaJ domain signature | 82 | 102 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g04208 | Adu-Chr3 | 131138451 | 131139272 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g04208 | 43 | 108 | C2H2 Transcription Factor Family | AT1G74250 | 44.118 | 1.02e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g04208 | - | - | gmx:100811478 | 177.948 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu03g04208 | 03 | 131138451 | 131139272 | Adu10g00549 | 10 | 6230380 | 6230856 | PCT |