Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04193 ATGCATGACAGCATGAGTTTTCAGTTTTCACGTGCTAATGAATCAAATTTCATTGATGCTTTATGGATTTTCCTGTGCACAACCGCCGACGACCTCTTCCCTCTCTTTGACAAGTATGGCAAGGTCGTCGACATCTTCATCCCCAAAGATCGAAGGACTGGCGAGTCCAGGGGTTTTGCCTTTGTGCGTTACAAGTATGCCGATGAGGCTCAGAAGGCCGTCGAAAGGCTTGACGGAAGAATGGTTGATGGTCGGGAAATAACTGTCCAATTTGCAAAATATGGCCCCAATGCAGAGCGCATTCACAAAGGAAGGATTATTGAATCAATGCCAAGAACAAGGCATAGGTCAAGGAGCCGCAGCCCAAGGAGAAGGTACCGTGATGATTACAGAGACAGGGATTACCGTAGGAGAAGTCGTAGCAGAAGTTATGATAGGTATGAACGTGACCGGTACCGTGGGAGGGACAGAGATTATCGTCGTCGAAGCAGAAGCCGCAGTGCCAGCCCTGATTACAAGAGTCGAGGGAGGGGGCGCTATGATGATGATGATGATCGTCGTAGTAGAAGCCGGAGCCGATCGGTGGATAGCCGCTCCCCTGTACATAGTCCTAGTCCTCGAAGGAGTCCTTCACCCCGCAGGAGTATGTCTCCTGAAAGGAGTGCATCCCCGAGAAGTCCTAGAGGTGAAAGTCCTGATCATCGTAGCCGTGATGGACGATCTCCCTCACCTCGCAGTGTCTCACCGCGTGGTCGCCCTGATGCTTCGCGAAGCCCATCTCCTCGGAATTCAAATGGTGATGAGTAA 807 0.5105 MHDSMSFQFSRANESNFIDALWIFLCTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIESMPRTRHRSRSRSPRRRYRDDYRDRDYRRRSRSRSYDRYERDRYRGRDRDYRRRSRSRSASPDYKSRGRGRYDDDDDRRSRSRSRSVDSRSPVHSPSPRRSPSPRRSMSPERSASPRSPRGESPDHRSRDGRSPSPRSVSPRGRPDASRSPSPRNSNGDE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04193 268 MobiDBLite consensus disorder prediction 102 268 - -
Adu03g04193 268 MobiDBLite consensus disorder prediction 123 196 - -
Adu03g04193 268 SUPERFAMILY RNA-binding domain, RBD 27 102 IPR035979 GO:0003676
Adu03g04193 268 MobiDBLite consensus disorder prediction 197 224 - -
Adu03g04193 268 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 88 IPR000504 GO:0003723
Adu03g04193 268 MobiDBLite consensus disorder prediction 226 241 - -
Adu03g04193 268 Gene3D - 25 103 IPR012677 -
Adu03g04193 268 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 14 94 IPR000504 GO:0003723
Adu03g04193 268 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 21 268 - -
Adu03g04193 268 SMART rrm1_1 20 90 IPR000504 GO:0003723
Adu03g04193 268 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 21 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04193 Adu-Chr3 131005359 131009649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04193 10 89 Eukaryotic Initiation Factors Gene Family AT4G34110 40.244 5.00e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04193 K12891 - gmx:100778928 211.846