Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04186 ATGGCGGAGCGTTCTTCCTCTTTTGGACTTGGTCCTCGATTAGATCTTCAGCAACTGCAGTTTGAAGCACAGCATCGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGTAACTATCGTATGTTTCATATCACATCAGAACCACCAAACAGGCCACCAAGTGGTTCGCTTTTTCTTTTTGATCGGAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCACGGAGAAGAAAATGAAAATTTTCAGAGGCGTAGCTATTGGATGCTTGAACAGGATATGATGCATATAGTATTTGTCCACTATTTGGATGTTAAGGTTAACAAGACCAATATCGGTAGAAATATTGATACAGATGAGGCTATGTCAGAATCCCAGAAGGGCAGTTCTGTGTTATCTGGCTTCCCCACAAGTTATAACAGCATGCCTTCTCGAAGTACAGATTCCATGAGTCCGACTAGCACTTTGACGTCATTATGTGAAGATGCTGATTCTGAGGATATTCGTCAAGCAAGTTCTGGAATGCACTCGTTTGGCAACTCTTTGGGGAGTGGTCAGGCAATGGATAGCATTGATACTTGTTCAAATAGATCATATTTTATGCTTCCCATTTCAGGTGATCATGGACAATCAACAATTTCTGTAACAGACTACATTCCACATGTCCAAGGGGATACATCTAGATTAGGTATTACTGCTTACATTGAGGACCAAAAATCACATGTCATGCCATTAAGGGACACTATCACAGAGCAATCTGTTGGATTGTATACACCTTGTTCTTCCATTTCATCCGGTTCAATGGGAAGCACCCTTGAACAAGAAAAAGCTGTTCCTGAGAATCTCTACGGATCTAAAAGTGGCCTCAATGAGGACTCAAGGGGTTCTCAGTCTACCCAGTCAAATTGGCAGATTACTTTTGATGAGAATACTGGACCTTTGCCAAGATGGAGCCTAACCGAATCGTTGGGTTTGGAATTTGAATCTGATTATAGCATGGCTTTATTTGGGAGTGAAACTGATAATGCAATTCCAGAGATTTGCCCTGACTTGTTCACTTCTAATGGAGAGCTAAAAGAGCAACCTGTGCAACAGAAGTTCCCAAAGCAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACAGTGAATATGAACTTCCTCGGGAGGATAGTACTGGCTATTCCTTGAATGCAAAGCATGCATTACTTGATGGAGAGGAGAACCTGAAGAAGGTTGATAGCTTCTCAAGGTGGATTACTAAAGAACTTGGAGAGGTGGATGATCTGCATCTGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAGTGTGGGCATGTAATAGATGATACATCATTGAACCTGTCCTTATCCCAAGATCAGCTGTTCAGCATAAGTGATTTTTCACCTAAATGGGCTTATGCAGATTCCGAGATTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACTGGAGGTGGAAGCCTGTCACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACATGA 1707 0.4259 MAERSSSFGLGPRLDLQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDVKVNKTNIGRNIDTDEAMSESQKGSSVLSGFPTSYNSMPSRSTDSMSPTSTLTSLCEDADSEDIRQASSGMHSFGNSLGSGQAMDSIDTCSNRSYFMLPISGDHGQSTISVTDYIPHVQGDTSRLGITAYIEDQKSHVMPLRDTITEQSVGLYTPCSSISSGSMGSTLEQEKAVPENLYGSKSGLNEDSRGSQSTQSNWQITFDENTGPLPRWSLTESLGLEFESDYSMALFGSETDNAIPEICPDLFTSNGELKEQPVQQKFPKQSTDAQSQHAPRSDSEYELPREDSTGYSLNAKHALLDGEENLKKVDSFSRWITKELGEVDDLHLQSSPGISWSTDECGHVIDDTSLNLSLSQDQLFSISDFSPKWAYADSEIEVLIIGAFLKSQLEVEACHWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVT 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04186 568 SMART CG_1_2 19 137 IPR005559 GO:0003677
Adu03g04186 568 MobiDBLite consensus disorder prediction 392 423 - -
Adu03g04186 568 SUPERFAMILY E set domains 498 568 IPR014756 -
Adu03g04186 568 MobiDBLite consensus disorder prediction 392 413 - -
Adu03g04186 568 Gene3D Immunoglobulins 491 568 IPR013783 -
Adu03g04186 568 Pfam IPT/TIG domain 497 566 IPR002909 -
Adu03g04186 568 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 568 - -
Adu03g04186 568 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Adu03g04186 568 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Adu03g04186 568 MobiDBLite consensus disorder prediction 151 188 - -
Adu03g04186 568 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 6 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04186 Adu-Chr3 130949382 130954028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04186 1 568 CAMTA Transcription Factor Family AT5G64220 47.569 6.11e-154 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04186 K21596 - gmx:100795682 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04186 03 130949382 130954028 Adu10g00531 10 6035958 6043514 PCT