Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04185 ATGATGCTTCATTTGCGACTTGATGAGTTACTTTCTTCGAAATCAGTGCTATCTACTAATCAAGATTTTGAGGGTTATATGGAGACAAGAAACTTAATTTTTAAGCTCATCTCACTTAAAGAGGAAGAGGAATATTCACATAAGGAAGAGGCAACTGCAGGGTTGAGTGTATCACAACACAAATTGGAGGAGCATGTGTTTCACAGGAAGATTAAAGAGAAGCTCTACTCATGGCTTCTTCACAAGGTAACTGAAGGTGGTAAAGGGCCAAATGTATTAGACAAGGATGGTCAGGGTGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCAATAACTCCAGTTATAACTGCTGGGGTTAATATCAACTTCCGTGATGTGAATGGATGGACAGCTTTACATTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGGTGCAGCAGCTGGAGCATTGACAGATCCAAGTCCAGCATTTCCTTCTGGTAGAACAGCTGCTGATCTTGCTTCTAGCAATGGACATAAAGGAATCTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACCTTGCGTCACTTACAATGGATGATCCAAGTGAAGATGGTAGGAATAAAACTTTAGGTGGGAAAGCAGTGCAGACAGCTTCGGAGCGAAGTGCAACACCTCTACTTTATGGTGATGTATCGGATACTCTCTGCCTTAAGGATTCTCTTTCTGCTGTCCGTAATGCTACACAAGCCGCCGATCGCATACATCAAGTATTTAGGATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTGTGAAGACGATGATGAGTTTGGATTGTCAGATCAACAGGTTCTTTCCTTTATAGCTTCTAGGGCTTGCAAATCTGGACAAGGAGAGGGTTTAGTGAATGCTGCTGCAATACAAATTCAGAAAAAATTTCGTGGTTGGAAGAAGAGAAAAGAATTCCTGATCATTCGCCAAAGAGTTGTCAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGGAAGCAATACAAATTAATCTGGTCTGTTGGAATCCTTGAGAAGGTCATATTACGCTGGAGACGTAAGGGCAGAGGCTTACGTGGATTCCGACCAGATACCCTTAACATGGTCCCCAACCCACCAAGCAATCCTTCACAAGAGGATGACTATGATGTTCTCAAAGAAGGAAGGAAGCAAAGTGAAGAAAGGTTCCAAAAAGCCCTTTCAAGGGTGAAATCCATGGTCCAGTACCCGGAGGCACGTGCTCAATACCGGCGGGTGCTGAATGTAGTAGAGGACTTTCGTCAAACCAAGCAGGAATATACCAATTCGGAAGACACTGTTGATGGGGTGGCGGATTTGATTGATATTGATATGCTTTTGGACGATGAGAACTTGCCTATAGCATATGATTGA 1434 0.4358 MMLHLRLDELLSSKSVLSTNQDFEGYMETRNLIFKLISLKEEEEYSHKEEATAGLSVSQHKLEEHVFHRKIKEKLYSWLLHKVTEGGKGPNVLDKDGQGVLHLVAALGYDWAITPVITAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGAAAGALTDPSPAFPSGRTAADLASSNGHKGISGFLGESLLTSHLASLTMDDPSEDGRNKTLGGKAVQTASERSATPLLYGDVSDTLCLKDSLSAVRNATQAADRIHQVFRMQSFQRKQLAQCEDDDEFGLSDQQVLSFIASRACKSGQGEGLVNAAAIQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKQYKLIWSVGILEKVILRWRRKGRGLRGFRPDTLNMVPNPPSNPSQEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKQEYTNSEDTVDGVADLIDIDMLLDDENLPIAYD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04185 477 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 477 - -
Adu03g04185 477 ProSiteProfiles Ankyrin repeat region circular profile. 129 154 - -
Adu03g04185 477 Pfam IQ calmodulin-binding motif 331 350 IPR000048 GO:0005515
Adu03g04185 477 Pfam IQ calmodulin-binding motif 308 326 IPR000048 GO:0005515
Adu03g04185 477 ProSiteProfiles IQ motif profile. 307 335 IPR000048 GO:0005515
Adu03g04185 477 SUPERFAMILY Ankyrin repeat 85 188 IPR036770 -
Adu03g04185 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 352 IPR027417 -
Adu03g04185 477 Gene3D - 65 195 IPR036770 -
Adu03g04185 477 ProSiteProfiles Ankyrin repeat profile. 129 161 IPR002110 GO:0005515
Adu03g04185 477 Pfam Ankyrin repeats (3 copies) 101 184 IPR002110 GO:0005515
Adu03g04185 477 Gene3D - 306 353 - -
Adu03g04185 477 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 477 - -
Adu03g04185 477 SMART iq_5 305 327 IPR000048 GO:0005515
Adu03g04185 477 SMART iq_5 328 350 IPR000048 GO:0005515
Adu03g04185 477 MobiDBLite consensus disorder prediction 376 395 - -
Adu03g04185 477 ProSiteProfiles IQ motif profile. 329 354 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04185 Adu-Chr3 130946900 130949305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04185 3 472 CAMTA Transcription Factor Family AT5G09410 58.811 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04185 K21596 - gmx:100795682 722.235