Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04182 ATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGAGGGGTGGTTGGAGGGCATTCTTCAAGTAACTCTGGAAAGGGCAAGAGCCATCAGTCTACAACCAAGTATGGCTATAGCCTTGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCGAAATTTGTCCAGTTCAAGGGGCAAGAGCTGGGACTTTTTGCTATATATGATGGACACTTGGGAGATAGCGTACCAGCATATTTACAAAAGCATCTTTTTTCAAATATCTTGGATGAAAAGGACTTTTGGGAAGATCCGTTCATGTCTATTTCTAAAGCTTATGAGACAACAGATCAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGGTCAACTGCTGTGACTGCAATTCTTATAAATAGTCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCGCGAGCATTTGGAGACAGAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTATGCCGATATTAACCCAAATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAACCAAGAGGCTGTAGATATTGCAAAAAGGATAAAGGATCCACAAAGGGCAGCCCAACAACTAGCCACCGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGGGATGA 849 0.4429 MDSLCCFSSVRGVVGGHSSSNSGKGKSHQSTTKYGYSLVKGKANHPMEDYHVAKFVQFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILDEKDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINSQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQYADINPNIELLILASDGLWKVMGNQEAVDIAKRIKDPQRAAQQLATEALNRDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04182 282 Gene3D - 15 282 IPR036457 -
Adu03g04182 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Adu03g04182 282 SMART PP2C_4 29 278 IPR001932 -
Adu03g04182 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Adu03g04182 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Adu03g04182 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Adu03g04182 282 CDD PP2Cc 33 280 IPR001932 -
Adu03g04182 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Adu03g04182 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04182 Adu-Chr3 130930539 130934120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04182 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 8.60e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04182 K17506 - gmx:100801722 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04182 03 130930539 130934120 Adu03g04182 03 130930539 130934120 ECH
Adu03g04182 03 130930539 130934120 Adu10g00530 10 6029420 6032951 PCT