Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04178 ATGACCTTCCCTGACTATTATGAGCCTAGTTCTATTGCTGTTGAATCTAATAATAATACCATTGAGGAGGAGGGTATATTTTTGACATGGAAGGATTTGCATGTGAGTGTTCCAAGTGGAAAGAAATATGCATATGGTCGGAAACCAATATTGAAGGGCCTAACTGGCTATGCCAAGCCAGCCCAACTCTTGGCTATTATGGGTCCTTCTGGCTGCGGCAAGTCCACCCTTCTTGATGCCTTAGCTGGAAGATTGGGTTCAAACACAAAGCAAACAGGGAAGATTCTGATTAATGGTCGGAAAGAAGCACTCGCTTATGGAACATCGGCATACGTAACACATGATGATGCCGTATTAGCAACACTGACAGTTGGAGAAGCAGTGAACTACTCAGCACAGCTTCAATTTCCAAACTCAATGTCGAAGAGAGAGAAGGAAGAGAGAGCAATCTCTACAATCACCCAAATGGGTCTGCAAGATGCCACCAACACAATGATTGGAGGGTGTTTGTCGAAAGGCCTCAGTGAAGGACAAAAGAGGAGACTCAGCATTTGCATTCAGATTCTCACCAGCCCAAGTCTTCTCCTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCCTACTATGTCATGACTAGAATTGCAAGTCTAAAGGCAAGAGATGGCATCAAAAGAACCATTGTTGCATCCATTCATCAACCTAGTAGTCAGCTTTTTCAACTCTTTCAAGACCTTTGCCTTCTCTCTTGCGGTGAGACTGTATATTTTGGCCCAACTTCTGCAGCTACAAAGTTTTTTGCTTCACGTGGCTTTCCTTGTCCACCTCTCCACAACCCTGCTGACCATTTCTTGAGGATCATAAACAAGGATTTCAAAATGGTCGAAGAAGACTGTTTCCACATAGGAATGAAGAATGAAGATACCGTTAAGATCCTTGTGAAGTTTTATTCATCATGTAAAATTAATAAGCAAGTTCGGAAGGAAGTAGCAACAATATGTGAAAAAGAATATGGTTTTGTGGAGAGGAAAAGAAGACAAGCTTCGTTTATAACTCAGTGCAACATTCTTTTGAGAAGATCTTCGCTACACTTATTTCGTGATGTAAGCAATTACTGGTTACGCATAGCAATCTTTACCATAGCAGCTGTAAGTCTGGGCACTATCTTCTTAGATGTCACTTCAAGTGATGCATCAATTCAGGCTAGAGGATCTCTGGTCTCTTTTGTTGCATCAGTCCTAACTTTCATAACCCTTCTTGGTGGATTCCCCCCATTTGTGGAGCAAATGAAGGTAAAGAATTGCTCTCAAACAATGTAG 1323 0.4187 MTFPDYYEPSSIAVESNNNTIEEEGIFLTWKDLHVSVPSGKKYAYGRKPILKGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGSNTKQTGKILINGRKEALAYGTSAYVTHDDAVLATLTVGEAVNYSAQLQFPNSMSKREKEERAISTITQMGLQDATNTMIGGCLSKGLSEGQKRRLSICIQILTSPSLLLLDEPTSGLDSAASYYVMTRIASLKARDGIKRTIVASIHQPSSQLFQLFQDLCLLSCGETVYFGPTSAATKFFASRGFPCPPLHNPADHFLRIINKDFKMVEEDCFHIGMKNEDTVKILVKFYSSCKINKQVRKEVATICEKEYGFVERKRRQASFITQCNILLRRSSLHLFRDVSNYWLRIAIFTIAAVSLGTIFLDVTSSDASIQARGSLVSFVASVLTFITLLGGFPPFVEQMKVKNCSQTM 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04178 440 Gene3D - 38 269 IPR027417 -
Adu03g04178 440 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Adu03g04178 440 SMART AAA_5 60 261 IPR003593 -
Adu03g04178 440 Pfam ABC-2 type transporter 234 294 IPR043926 GO:0140359
Adu03g04178 440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 277 IPR003439 GO:0005524
Adu03g04178 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 269 IPR027417 -
Adu03g04178 440 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 19 434 - -
Adu03g04178 440 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 19 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04178 Adu-Chr3 130902791 130905488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04178 43 212 Calmodulin-binding Proteins AT2G36910 29.508 1.78e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04178 K05681 - adu:107481533 848.58