Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04174 ATGGCTTCTCTTCATCATCACCCTCTTCCATATTCTGAAGCCAAACCCAACAATTCAATTGTTCTAGAGATTCATCAGGATGAGACCATCACTACTACTAGTGCTGTGGCACATATGGAGGAGGCTTCAAGAAAGAGCAATGGAGAAGAGAAGAGCAATCCTATCTGTTTGACATGGAAGGATCTTTGGGTGAATGCTTCCATGGGGAAGAAAGGGACCAAAGCTATCCTTCAGGGGCTAACCGGTTATGCCAAACCGGGTCAGCTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTTGATACTTTAGCAGGTAGATTGGGTTCAAACACAAGACAAACTGGAGAGATTCTTGTCAATGGTCACAAACAATCACTGGCTTATGGAAGCACGGCATACGTGACACAAGATGATAGCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTACCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATAAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGACGTGTAAGCATCTGCATTGAGATACTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCCTATTATGTCATGAAAAGAATTAAATCCCTTCATCATAAAGATGGTATTCAAAGGACTATCATAGCGTCAATTCATCAACCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTGTGTTTGCTCTCTGCTGGAAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTCTTCGCCTCAAATGGTTTTCCTTGTCCCGCTCTTCAAAATCCATCTGATCACTTGTTGAAAACTATAAACAAGGACTTTGATCAGGAAATGGAGGTAGGTTTAGCCGGGACGAGTGGAGGAGCATTACCGGCAGAAGCAGCAATCGGAATCCTTGTGAACGCATACAAAGCCTCAGAAATAAACGAACAAGTTCAAACGGAAGTAACTGCCATATCTAAAATGGAAATTAGGTACGTAGAGAAGAAGAGAGGACATGCAAGCTTCCTTAGGCAGTGCATTGTTCTTACAAAAAGATCATTTGTGAACATGTCCCGCGATCTAGGCTATTATTGGCTGCGCCTTGCTATATATATTGCCTTGGCTATAAGTTTAGCCACTATCTTCTATCATTTAGACACAAGTTATGCTTCAATTAAGGATAGAGGGTCACTTCTTGCATTTGTATCCACTTTCATAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTCGAAAGAGAAAGGCTAAATGGGCATTATGGTGTGACTGCGTTTGTGATAGGAAACACCTTATCAGCCATCCCATTTGTGTTGCTAGTTTCTTTCATTCCGGGAGCTATAGCATACTACCTCCCTGGTCTTCAGAGTAGATACGACCACTTCCTTTACTTCATTTGTGTTCTATTTTCTTGCCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCAAGCGTGGTTCCAAACTACCTAATGGGAATCATAACCGGCTCTGGAATCCAAGGCATCATGATCTTAGTTGCTGGCTTCTTCAAACTGCCAAGCACCATTCCTAAGCCATTTTGGAGATACCCTTTGCATTACATAGCATTCCACACTTATGCATTCCAAGGATTGTTCAAGAACGAATATGAAGGCTTGAAATTCCATGGAGGCTCATCACACAAGTACATTACGGGTGAAGAGATTATGAGGGACACGTGGCAAACAGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATATTAGTAGGGATGATTGGTGTGTATCGTGTTATGTTTTTGGTTATCATAAAGATTACTGAGAAGGTGAAGCCTATTGTTGGATCCTTCAAGCTGAGGTCTCCCAAACAAACAATTTATGTCGTCGAAAATCCCAATGCTACTCCTTTGCATGTGGAGCTTGTATGA 2064 0.4225 MASLHHHPLPYSEAKPNNSIVLEIHQDETITTTSAVAHMEEASRKSNGEEKSNPICLTWKDLWVNASMGKKGTKAILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILVNGHKQSLAYGSTAYVTQDDSLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLHHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPALQNPSDHLLKTINKDFDQEMEVGLAGTSGGALPAEAAIGILVNAYKASEINEQVQTEVTAISKMEIRYVEKKRGHASFLRQCIVLTKRSFVNMSRDLGYYWLRLAIYIALAISLATIFYHLDTSYASIKDRGSLLAFVSTFITFMSIGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTLSAIPFVLLVSFIPGAIAYYLPGLQSRYDHFLYFICVLFSCLMLVESLMMIVASVVPNYLMGIITGSGIQGIMILVAGFFKLPSTIPKPFWRYPLHYIAFHTYAFQGLFKNEYEGLKFHGGSSHKYITGEEIMRDTWQTDMSYSKWVDLAILVGMIGVYRVMFLVIIKITEKVKPIVGSFKLRSPKQTIYVVENPNATPLHVELV 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04174 687 CDD ABCG_EPDR 54 285 - -
Adu03g04174 687 Pfam ABC-2 type transporter 383 595 IPR013525 GO:0016020|GO:0140359
Adu03g04174 687 Pfam ABC-2 type transporter 260 322 IPR043926 GO:0140359
Adu03g04174 687 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Adu03g04174 687 Gene3D - 56 316 IPR027417 -
Adu03g04174 687 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 2 683 - -
Adu03g04174 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 683 - -
Adu03g04174 687 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524
Adu03g04174 687 SMART AAA_5 86 280 IPR003593 -
Adu03g04174 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 295 IPR027417 -
Adu03g04174 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 303 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04174 Adu-Chr3 130829940 130834209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04174 87 263 Calmodulin-binding Proteins AT2G36910 29.255 9.68e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04174 K05681 - gmx:100794527 975.311