Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04170 ATGAGCTCTATTCTTCAGCCTCATGCTAGTGATTGTGAATTACCAAACAACATGCTACCCGTTTTGTTGGAATATGAGACCACATTTGAGGTGGAAGCCATGAATGAGGTGGATCATCAAGAGGAGAAGGGGGTTTTCATAACATGGGAGGATCTATGGGTGACAGTCTCAGATGGCAAGAATGGAAGGAAAGCAATACTTCAGGGCCTGAAAGGTTATGCCAAACCAGGGCAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAGTCTACTCTTCTTGATGCCTTAGCAGGGAGATTAGGTTCAAAGTCAAAGCAGACTGGGATGATCCTAATCAATGGCCGCAAACAAGCACTGGCATATGGAACATCTGCATATGTCACAGAAGATGATACTATCTTGACAACACTGACAGTTGGAGAAGCTGTATACTACTCAGCCCAGCTCCAATTACCAGATTCCATGTCCAAATCAGAGAAGAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGCCTGCAAGATGCCATCAACACAAGAATTGGAGGGTGGGGATCTAAGGGAATTAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCTTATTATGTTATGAGTAGAATTGCAAGCTTAAATAAAAAAAATGGAATTCAAATGACTATTATTGCATCAATCCATCAACCAAGTAATGAAATCTTTCAGCTTTTCAACAATCTCTGTCTCCTCTCTTCTGGTAAAACAGTCTACTTCGGACCTGTCTCAGCTGCCAATAAGTTTTTCTCATCAAATGGTTTTCCTTGCCCAAGTCTCCAGAATCCTCCTGATCACTTTGTAAAAATTATTAACAAGGATTTTGAACAGGAGGAGGACCCTGAGAAAGGATTAGCTAGAGGGCTAACCACAGAAGAAGCAATTCATATACTTGTTGAATCATATGATTCATCTAAAATTAGTCACCAAGTTCATAAAGAAATATCTCAAATGAAAAAAAGGGACTCAGATGCAATGGAGAAGAAAAGTCATGCTGATTTTTTAACACAGTGCATGGTCCTTACTAGGAGATCTTTTGTGAACATGTATCGTGAAGTAGGCTACCACTGGTTGCGCCTACTTATCTATGGTGCTCTGGCTTTAAGTCTTGGTACCATGTTTTTTCACATTGGCTCAAGCAGTGAATCAATTCAGGCCAGAGCTTCACTGCTTGTGTTTGTTGTTACATTCCTTACCTTCATTACTGTTGGTGCATTCCCTTCTTTTGTGGAAGATATGAAGGTGTTTGAAAGAGAAAGACTGAATGGACATTATGGGGTAACTGCATACACCATTGGCAACACATTATCTTCAGTTCCATTCTTGCTATTGATGTCACTCATCCCTGGAGCAGTGGTTTATTACTTGGTTGGACTTCACCAAGGACACAAAGAATTCATCTACTTTACATCTGTACTCTTTGTTTCTGTCTTTTTGGTTGAGGGTCTCATGATGATTGTTGCAAGCATTGTCCCCAATTTCCTGCTAGGCATAATCTTCGGCACCGGAATATTGGGAGTGATGATGTTGGATGGTGGATTCTATAGGCTTCCAAGCGATATCCCTAAACCGTTTTGGAGATACCCTTTGCATTACATTTCATTCCACAAGTATGCATACCAAGGATTGTTCAAGAACGAGTTTCAAGGCCTAACATTCACCGGCAATAATCAAGATGGAGGAGCTATGATAAACATTAGTGGGGAAGAGATACTTAGAAACTTGTGGCAAGTGGAAATTGGTTACTCAAAATGGAATGATGTTGCTATATTGATAGGAATGGCAGTGACATACAGATTGTTGTTCTTGGTGATCATCAAGAGCTTTGAGAAAGTGAAGCCTATTATTGTGACAGCAATGAATAATTGCCCGCAAGCAAAGTTCAGTGCAGAGTTATCATCATTATTCTCCATCACTAGTGTTGCTCGCTTGGGAGACCCTGAAATGAATGACAAAAAAAAATGGCTTCAACTTCTCCGTAATCTTGATGATCAAGAAGAACAACACTCGATACACCAAAATTATCCCAAGCAAGATTCCAAGATCGACCCACTTGGAAGAAATCACACCAACGCAACCACAAAACCCCAGCACTGTAAGCCTACACCACCGCCACAAGGAGTGGCATACTGCCGCCGTCCGTCGCACTCAAAGTTCGCCATCCGTCATCTAGCTTCCCTCGTGCTCCAAGTCTTCAACCCCTGTTCGCTGTCACCGATCGCGGTGCGTTCTTCGCCGTTCACGTTCGCTCGGCGTTCACCGTTCGCGTTCACTCGCTGTTCACCGTTCGAGTTCGCGTTCGTCTGGAAGCCACGTTGCTCTGCTTCAAACTCTGCGACCAACCCGCGCCTCCACTCAGCCGTCCAACTGCTCTCTGTTGTCCCCGCCGTGAGTTTCCTAAACCCGCCACCAGACAATACACTCACACAACACCAATACTCTTCTTCAAACTCTGCAACTTCTGATTTCTATTAA 2577 0.43 MSSILQPHASDCELPNNMLPVLLEYETTFEVEAMNEVDHQEEKGVFITWEDLWVTVSDGKNGRKAILQGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKSKQTGMILINGRKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKERAEFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNKKNGIQMTIIASIHQPSNEIFQLFNNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPPDHFVKIINKDFEQEEDPEKGLARGLTTEEAIHILVESYDSSKISHQVHKEISQMKKRDSDAMEKKSHADFLTQCMVLTRRSFVNMYREVGYHWLRLLIYGALALSLGTMFFHIGSSSESIQARASLLVFVVTFLTFITVGAFPSFVEDMKVFERERLNGHYGVTAYTIGNTLSSVPFLLLMSLIPGAVVYYLVGLHQGHKEFIYFTSVLFVSVFLVEGLMMIVASIVPNFLLGIIFGTGILGVMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFTGNNQDGGAMINISGEEILRNLWQVEIGYSKWNDVAILIGMAVTYRLLFLVIIKSFEKVKPIIVTAMNNCPQAKFSAELSSLFSITSVARLGDPEMNDKKKWLQLLRNLDDQEEQHSIHQNYPKQDSKIDPLGRNHTNATTKPQHCKPTPPPQGVAYCRRPSHSKFAIRHLASLVLQVFNPCSLSPIAVRSSPFTFARRSPFAFTRCSPFEFAFVWKPRCSASNSATNPRLHSAVQLLSVVPAVSFLNPPPDNTLTQHQYSSSNSATSDFY 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04170 858 Pfam ABC transporter 69 218 IPR003439 GO:0005524
Adu03g04170 858 Gene3D - 46 314 IPR027417 -
Adu03g04170 858 SMART AAA_5 76 265 IPR003593 -
Adu03g04170 858 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 293 IPR003439 GO:0005524
Adu03g04170 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 282 IPR027417 -
Adu03g04170 858 Pfam ABC-2 type transporter 370 582 IPR013525 GO:0016020|GO:0140359
Adu03g04170 858 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 38 654 - -
Adu03g04170 858 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 38 654 - -
Adu03g04170 858 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524
Adu03g04170 858 Pfam ABC-2 type transporter 250 316 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04170 Adu-Chr3 130808083 130813215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04170 77 228 Calmodulin-binding Proteins AT2G36910 30.675 2.48e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04170 K05681 - gmx:100789571 1073.15