Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04169 ATGGGAGGCACTCAGGGAGAAGAAAAGGAAGACGTAACAGTGACATGGCAGAATTTGTGGGTTACTGTTGCAGATGGAAACAAAAGGAAACCAATTCTGCAGGGTCTCACCGGTTATGCTCAACCGGGGAAACTTTTGGCCATAATGGGTCCTTCTGGCTGTGGCAAATCCACGCTTCTTGATGCCTTATCAGGGAGATTAAGCTCTAGCGTCAAACAGACGGGTAAAATTTTAATCAATGGCCACAAACAAGCACTGGCTTATGGAACTTCGGGATATGTAACACAAGATGATGCTATGCTGTCAACTTTGACCGCTGGGGAAACTTTATACTACTCAGCTCAGCTCCAGTTTCCAGATTCCATGTCCACTTCTGAGAAGAAGGAACGAGCTGATATAACACTGAGGGAAATGGGACTCCAAGATGCCATTGATACAAGGGTTGGAGGATGGGGTTCTAAAGGCCTAAGTGGTGGACAAAAGAGGAGACTCAGCATCTGCATTGAGATCCTAACACGCCCAAAGCTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCAAGCCTAAGCCTAAGGGATGGCATCCAAAGAACTATTGTTGCTTCAATCCATCAACCAAGTAGTGAAGTCTTTGAACTCTTCCATGATCTCTGTCTTCTGTCTTCTGGTCAAGCAGTATATTTTGGTCAAGCGTCTCATGCTAATCAGTTTTTTTCTTCAAATGGCTTTCCTTGCCCAGCTCTCCACAATCCCTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGACCAAGATGTTGAAGAAGGTTTTGGATTCGGAGTTACTGCTGAAGTAGCAATTGACATCCTTGTAAAGTCTTATGGATCATCTGAGATTAAAAACCAAGTTAATAATGTAGTGGCAACAATAACTGAAAGTAATTCAGGAGCAGTTGGGAAGAAGAGGGTCAACGCCACATTCCTCACTCAGTGCCTCGTTCTTATGAGAAGATCTTCGCTGCGATTGTTTCGCGACTTGAGCAATTACTGGCTGCTTCTTGTTGTCTTTATTGCAGTAGCTATTAGCATGGGTTCCATGTTCTATGACATTGGCTCAAGTAATGGATCAATTCAAGGAAGAGGGTCTCTGCTTACTTTTTTGATATCAACTCTGGCATTCATGGCTCTTATTGGAGGATTCGCTCCATTAATGGAGGAAATGAGGGTATTTGAAAGAGAGAGACTAAATGGTCACTATGGTATTATTGCTTTTCTCACAGGCAAAATATTCTCAGCACTTCCATATATGCTAATGATATGTCTAATTCCTGGAGGAATAATATATTACCTCTCAGGGCTGCAGAGAGGTTTAGAACACTTTGTGTACTTTGCTTCTGTTCTGTTTGCCATTGTGCTTTGGGTTGAGAGCCTCATGATGGTTGTGGGGAGTATGTTTCCCAATTTCGTAACCGGCATGAGCATTGCCGGCGGAATTCAAGGACTAACCATCTTAACTGGTGGATTCTACAGGCTGCCAAACGATCTTCCAAAACCATTTTGGAAATACCCCTTTTACTACCTTTCATTCCTTAAGTATGCTTTCCAAGGATGTTTCAAGAATGAATTTGAAGGCTTAAAATTTTCCATGGAACAAGGTGGAAGTGCAAAAACCATTATTAGTGGTAGAGACATTTTGACAAACACATGGCAGGTGGAAATGGGGCATTCCAAGTGGGTTGATCTTGCCATCATGTTTGGGATGATTGTTGTATATAGGGTTGTGTATTTGGCTATTACAAAAAGCAAGGAGAAGTTGAAACCTCTTGCTGCTTCCATTAACAATCACCCAACAAAAGTTTTCACCAGAGAGATTAGAATTAATGATAGAGCAAGCCCTGTATCTGAAAACCATGGTATCTTAGAATAA 1944 0.4167 MGGTQGEEKEDVTVTWQNLWVTVADGNKRKPILQGLTGYAQPGKLLAIMGPSGCGKSTLLDALSGRLSSSVKQTGKILINGHKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSTSEKKERADITLREMGLQDAIDTRVGGWGSKGLSGGQKRRLSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIASLSLRDGIQRTIVASIHQPSSEVFELFHDLCLLSSGQAVYFGQASHANQFFSSNGFPCPALHNPSDHYLRIINKDFDQDVEEGFGFGVTAEVAIDILVKSYGSSEIKNQVNNVVATITESNSGAVGKKRVNATFLTQCLVLMRRSSLRLFRDLSNYWLLLVVFIAVAISMGSMFYDIGSSNGSIQGRGSLLTFLISTLAFMALIGGFAPLMEEMRVFERERLNGHYGIIAFLTGKIFSALPYMLMICLIPGGIIYYLSGLQRGLEHFVYFASVLFAIVLWVESLMMVVGSMFPNFVTGMSIAGGIQGLTILTGGFYRLPNDLPKPFWKYPFYYLSFLKYAFQGCFKNEFEGLKFSMEQGGSAKTIISGRDILTNTWQVEMGHSKWVDLAIMFGMIVVYRVVYLAITKSKEKLKPLAASINNHPTKVFTREIRINDRASPVSENHGILE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04169 647 Pfam ABC-2 type transporter 335 548 IPR013525 GO:0016020|GO:0140359
Adu03g04169 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Adu03g04169 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 249 IPR027417 -
Adu03g04169 647 SMART AAA_5 42 235 IPR003593 -
Adu03g04169 647 Gene3D - 3 253 IPR027417 -
Adu03g04169 647 Pfam ABC-2 type transporter 216 275 IPR043926 GO:0140359
Adu03g04169 647 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 5 613 - -
Adu03g04169 647 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524
Adu03g04169 647 Pfam ABC transporter 34 184 IPR003439 GO:0005524
Adu03g04169 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04169 Adu-Chr3 130802908 130805953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04169 32 245 Calmodulin-binding Proteins AT2G36910 25.778 1.57e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04169 K05681 - gmx:100790102 954.125