Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04153 ATGGCTGACGTCAAGTGCTATGTTCCCCCTAATCAATTTAATATTGAGCAAATTCTTATAGAAGCTCAGCATCGATGGCTGCGCCCAGCTGAAATTTGTGAAATTCTCAGTAATTATAAAATGTTCCAAATTGCTCCAGAGCCTGCACATATGCCGCCAAGTGGTTCACTTTTCCTGTTTGATCGGAAGGTGCTGAGATACTTTAGAAAAGATGGCCACAACTGGAGAAAGAAAAAGGATGGAAAAACAGTGAGGGAAGCTCATGAGAGACTTAAGGCTGGAAGTGTGGATGTGTTGCACTGCTATTATGCACACGGAGAAGAAAATGAAAATTTTCAAAGACGCACATACTGGATGCTTGATGAGGAACTCTCGCACATTGTTCTTGTCCATTATAGGGAAGTGAAGGCAACTAAGGCAAATTTTAGAGGTGCTGCCAAAGAAAATCAAGAATCTCTTCCTTATGCACAAATTGACAAACTACCAGGTTCCACGGAGAAGGAAATGTCTTTATCATGTAGTCTTCATCCACATAACTACCAGGTTCCATCACATACAATAGATACAACAAGCATGAAGAGCACTCAAGCAACAGAATATGAAGAAGCTGAGTCAGCATTGAATAGTTACGCAAGTTCAGAAGACTACTCCTTCCTTGAAACACAACACCCAGCTGTTGAGAAGATTCCTGATACTTATTGCCTGCTGCAGTTCATAAATGAACAAGAGAAGTTGTGTGGCACTCCTGGGATGAATCATATCATGCTCAGTCAAGCTGGCAAAATCAAAGACATTCATAATGTTAGATTGGCATATGAACCCCCACAGCACCTTGGCTTTTCAATGTGGGAAAATATCTTGGAAAATAATGGGAGAAGTCAATACATGCCTCTTCAACCCATACTCCCTGAAATCCAACCTGATAACATGGGAATCAATAGCAATGCCTCTCTATTGAGGTCAAATTCCACCACCAATATTACCAAAGTGAATGGGACAGAAAATATGGTACAAGTTGAAGGAAATTGGCAGGTAATGAATGAGTTATATGAATTTGATCCTCAAAGATCCTTGGAACAGTGTCTTATACATCAAGATAAACCAAAGGTTCTTATGATAGATGACCCTCAAGAAAAACTATTAGATGCAAAAGAGAAGATAGAAACCAATAGAAGCCTGGATGGAATAGATGATACAAATTTAACTCTAAAGAAGGCTCTGTTAGATGGATCCCTTGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTGGAAGAATCTAAAACTCCATCCACTTTTAGTGCTTATTGGGGTACAGTTGAAAGTGAAAACGATGTGGACAATGCAACTATTCCTTCCGAAGTGCACCTGGATACCTATGCACTGGATCCATCTATTTCCCATGATCAACTTTTTACCATTATTGACTTTTCCCCAAGCTGGGCATTTGAAGGCTCAGAAATTAAGATTCTCATTTATGGACAATTCTTGAGGAGTCTACAGGAAGCAGAACAATGTAAATGGTCTTGCATGTTCGGTGAGGTAGAAGTGCCAGCTAATATCATTGACAATGGTGTTCTTTCTTGTTATACTCCTCCACACAAAACTGGGAGGATTCCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAATACGAGAATTTGATTTCCGAGACATTTACACTCAAGAAGTCAACAATGCAGCTGAGCAGAGAGAGAGCATTTCTGATAATTTCAGTGTGCGATTTGAAGAGCTGCTGTACATGGGGCATACCTTACCTCAAAACTTAGATCCAATCTGTGTAAGTGAGAAATCTGAACTGAGAAGTAAAATAAGTGCTTTGCTGAGGAAGGAGGAGGATGATTGGGATAAGTTGCTGAAACTCACTCTAGAGAAAGATTTTTCTCCACAAAATGTACAGGAGCAGCTGCTTCAAAATCTTTTGAAAGATAAGTTACTTCGGTGGCTCCTTCAAAAAGTCATTGAAGATGGGAAAGGCCCTAATGTATTGGATGAGGGTGGCCAAGGAGTACTTCATCTTGCGGCTGCTCTTGGCTATGATTGGGCCTTACAACCCACAGTAATTGCTGGTGTAAATGTGAACTTCCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCTGCATTCTGTGGCAGGGAGCTCACAGTTGCTTCCCTCATCTCTCTTGGCGCAGCACCTGGGGCGCTGACTGATCCAAGCCCAGAGCATCCTTCTGGTAGAACACCAGCTGACCTGGCTTCTGCAAACGGTCACAAAGGAATTGCAGGGTATCTTGCAGAATCTTCAATAAGCGTGCAACTATTATCTCTTGATATGAACAGGGACACGAGAGAAAGTTCTGGATCAAAAGTAGTATACAGGGTCCAACACAATACTACTGAAGTTAATGATGATCACCTATCATATGAACTGTCACTGAAAGATTCACTGGCAGCAGTGTGTAATGCCAGCCAGGCTGCTGCACGTATTCATGAAGTTTATAGAGTGCAATCTTTCCAAAGAAAACAACTGAAAGAATATGATGATAAATTTGGAATATCTGATGAAGATGCTCTTTCTCTTATAACTGTAAAACCACACAAGGTTGGACAACGCAATGAGCCTGTACATGCAGCTGCAATACGAATCCAGAACAAATTCCGCAGTTGGAAGGGCAGAAAAGAATTTTTGATGATTCGCCAAAGAATAGTTAAAATTCAGGCTCATGTAAGGGGGCACCAGGTTAGGAAGAACTGTGGAAAGATAATTTGGTCAGTTGGAATTTTAGAAAAAGTTATTTTGCGCTGGCGCCGAAAAGGTAGTGGTTTACGTGGATTTAAATTGGAAGATGTTCCCGAGGGAACTATGGTACAAGATACACAGTGCAAGGAGGATGAGTATGATTTCTTGAAAGAAGGCAGAAAGCAAACAGAGGAAAGGTTGCAGAAAGCCCTATCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGACCAATACCATAGGCTGTTGAATGTTGTAACTGAGATCCAAGAAAACCAGGTACTTTACCCCTTCTTTTACCCCTGCTTTGTAATTTTCATTCTGTTAAAAATATATCCAAACGTTCTCAAGCTCAACCTTGATTTCTTCGTGTAA 3180 0.4101 MADVKCYVPPNQFNIEQILIEAQHRWLRPAEICEILSNYKMFQIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYWMLDEELSHIVLVHYREVKATKANFRGAAKENQESLPYAQIDKLPGSTEKEMSLSCSLHPHNYQVPSHTIDTTSMKSTQATEYEEAESALNSYASSEDYSFLETQHPAVEKIPDTYCLLQFINEQEKLCGTPGMNHIMLSQAGKIKDIHNVRLAYEPPQHLGFSMWENILENNGRSQYMPLQPILPEIQPDNMGINSNASLLRSNSTTNITKVNGTENMVQVEGNWQVMNELYEFDPQRSLEQCLIHQDKPKVLMIDDPQEKLLDAKEKIETNRSLDGIDDTNLTLKKALLDGSLAEEGLKKLDSFNQWMSKELGDVEESKTPSTFSAYWGTVESENDVDNATIPSEVHLDTYALDPSISHDQLFTIIDFSPSWAFEGSEIKILIYGQFLRSLQEAEQCKWSCMFGEVEVPANIIDNGVLSCYTPPHKTGRIPFYVTCSNRLACSEIREFDFRDIYTQEVNNAAEQRESISDNFSVRFEELLYMGHTLPQNLDPICVSEKSELRSKISALLRKEEDDWDKLLKLTLEKDFSPQNVQEQLLQNLLKDKLLRWLLQKVIEDGKGPNVLDEGGQGVLHLAAALGYDWALQPTVIAGVNVNFRDVNGWTALHWAAFCGRELTVASLISLGAAPGALTDPSPEHPSGRTPADLASANGHKGIAGYLAESSISVQLLSLDMNRDTRESSGSKVVYRVQHNTTEVNDDHLSYELSLKDSLAAVCNASQAAARIHEVYRVQSFQRKQLKEYDDKFGISDEDALSLITVKPHKVGQRNEPVHAAAIRIQNKFRSWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKLEDVPEGTMVQDTQCKEDEYDFLKEGRKQTEERLQKALSRVKSMVQYPEARDQYHRLLNVVTEIQENQVLYPFFYPCFVIFILLKIYPNVLKLNLDFFV 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04153 1059 Pfam IPT/TIG domain 483 559 IPR002909 -
Adu03g04153 1059 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Adu03g04153 1059 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1028 - -
Adu03g04153 1059 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Adu03g04153 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 938 IPR027417 -
Adu03g04153 1059 SMART iq_5 888 910 IPR000048 GO:0005515
Adu03g04153 1059 SMART iq_5 911 933 IPR000048 GO:0005515
Adu03g04153 1059 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 1 1028 - -
Adu03g04153 1059 Pfam IQ calmodulin-binding motif 914 931 IPR000048 GO:0005515
Adu03g04153 1059 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Adu03g04153 1059 Gene3D - 645 791 IPR036770 -
Adu03g04153 1059 SUPERFAMILY Ankyrin repeat 670 782 IPR036770 -
Adu03g04153 1059 SMART ANK_2a 758 787 IPR002110 GO:0005515
Adu03g04153 1059 SMART ANK_2a 719 748 IPR002110 GO:0005515
Adu03g04153 1059 Coils Coil 980 1000 - -
Adu03g04153 1059 SUPERFAMILY E set domains 483 569 IPR014756 -
Adu03g04153 1059 SMART CG_1_2 18 136 IPR005559 GO:0003677
Adu03g04153 1059 ProSiteProfiles IQ motif profile. 890 918 IPR000048 GO:0005515
Adu03g04153 1059 Pfam Ankyrin repeats (3 copies) 691 785 IPR002110 GO:0005515
Adu03g04153 1059 Gene3D Immunoglobulins 477 572 IPR013783 -
Adu03g04153 1059 ProSiteProfiles IQ motif profile. 912 936 IPR000048 GO:0005515
Adu03g04153 1059 Gene3D - 887 935 - -
Adu03g04153 1059 ProSiteProfiles Ankyrin repeat profile. 719 751 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04153 Adu-Chr3 130645885 130652319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04153 59 1029 CAMTA Transcription Factor Family AT2G22300 49.000 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Adu03g04153 CG-1 6.5e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04153 K21596 - gmx:100798875 1477.23