Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04136 ATGGAACGTTACGAGGTAATCAGAGATCTCGGTTCAGGGAACTTCGGTGTAGCAAAGCTTATTAGAGAGAAATGCAGTGGTGACTTCTATGCTGTCAAGTTCATTGAGAGAGGCCTCAAGATTGATGAGCACGTGCAGAGGGAGATCATCAACCATAGGTCCTTAAAGCATCCCAATATCGTTAGGTTCAAAGAGGTCCTACTTACTCCAACACATCTTGCCATAGTGATGGAATATGCTGCTGGAGGAGAACTATTTGAGAGAATATGTAGTGCTGGAAGATTCAGCGAGGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGAGTCAGTTATTGCCATGCAATGGAAATTTGCCATAGAGATCTCAAGCTGGAAAACACACTTTTGGATGGAAGCACAGCACCAAGGCTTAAAATATGCGACTTTGGTTACTCAAAGTCTTCTGTTCTGCACTCGCAGCCAAAATCCACTGTAGGAACCCCTGCATATATTGCTCCAGAGGTCTTGTCAAGAAGAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTGATGCTCGTTGGTGCTTATCCTTTCGAAGATCCAGAAAACCCAAGAAACTTCAGAAAAACTCTTCAGCGAATTCTGAGTGTCCACTATTCTATTCCAGACTATGTTCGTATAAGCAAAGAGTGTAGACACCTTCTATCTCGAATATTTGTTGCCAACCCTGAAAAGAGAATTACCATACCAGAGATAAAGATGCTACCATGGTTCCAACAGAACCTACCACTAGAATTCACGGATGAGGGTGCAGGTAGCCTGCAAAATGGTGGTGGGAACCATGATGATGATAGTTCAGTTCAGAACATTGAAGAAATATTATCAATAGTACAAGAGGCTAGGAAGCCAAGTGAGGATAACCCAGAAGAAGCTGGTGGGCAGTTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGTAGATGCTGACATGGATGATATTGAAACAAGTGATGATTTCGTCTGCACTTTGTGA 1041 0.4313 MERYEVIRDLGSGNFGVAKLIREKCSGDFYAVKFIERGLKIDEHVQREIINHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHAMEICHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPENPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSRIFVANPEKRITIPEIKMLPWFQQNLPLEFTDEGAGSLQNGGGNHDDDSSVQNIEEILSIVQEARKPSEDNPEEAGGQFVGGSMDLDDIDVDADMDDIETSDDFVCTL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04136 346 PANTHER SERINE/THREONINE KINASE 2 340 - -
Adu03g04136 346 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Adu03g04136 346 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 340 - -
Adu03g04136 346 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Adu03g04136 346 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04136 346 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04136 346 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Adu03g04136 346 MobiDBLite consensus disorder prediction 302 324 - -
Adu03g04136 346 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04136 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Adu03g04136 346 CDD STKc_SnRK2 3 259 - -
Adu03g04136 346 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04136 Adu-Chr3 130538800 130541524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04136 3 268 CBL-interacting serine-threonine protein kinases AT5G25110 42.294 8.93e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Adu03g04136 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04136 K14498 - gmx:100807981 599.356