Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04129 GAAGCTGATGGGGGTTCACAAAGTAAGGAAGAAGAGAGAGTGTGCTCATGGTTATACACTTTGGCTCACTCTCAGAAATACATTGCCTTCGAGTATGTTGCTTCCACCGAAAGAGGCAATTTCACTGAAGCAGAGAGGAGGCTAAAGGAAAATGGGCCAAATGTTCCACTTGAGTATTCTTTTCCAAGGTGGTGGCATCTTTTGTGGAATTCTCTTTTCCATCCTTTTAACATGATCCTCATTGTTTTATCTGCAATGTCATTCATTGCTTGTGACGATGCAAATGGATGCATCATGCTTATACTGGTTTTCATTAGTGTTGCCCTTCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCCATGAAACTTTCTGAATTGGTAAGGTGCCCAGTAAAAGTGCAAAGATGCGCTGGTAGAGTTGTGCAGAGAGAGTTAATTGTTCAAGTTGATCACAGGGATATAGTTCCCGGCGACATTGTCATTTTTGAACCTGGTGATCTCTTTCCTGGTGATGTTAGGTTGTTATCTTCAAAGCATCTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGAGAAAACTGCTGATATCAGAGAAGATCAAAGCACTCCTTTATTAGATTTAAAGAACATCTGCTTCATGGGCACGAGCGTGGTTTCAGGTACTGGAACAGGATTGGTTGTATCGACAGGATCCAATACTTATATGAGCACCATGTTTTCAAAAGTTGGGAAGAGGAAGCCACCAGATGACTTTGAAAAGGGTCTCAAGTGGATATTTTACTTGCTTATTTCAGTTATGCTAGTGCTAGTTACAATTATGTTCTTGACAGATTACCTTACATCACTTAATTTGAGCAACAGCATTCTTTTTGCAATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATTGTGAATACATGTCTAGCCAAAGGAGCACTTGCTATGGCTAAAGACAAGTGTATAGTTAAAAGTTTGACTGCGATTCGCGAGATGGGATCCATGGATATTCTATGTATTGACAAGACAGGCACACTAACAATGAATCGTGCAATTATGGTTAATCATGTTGACAGCAAAGGGATGCCCCAAGAACAAGTTCTACGCTTTGCATTTCTCAATTCTTACTTCAAGATTGAGCAGAAGTATCCATTGGATGATGCAATTCTTGCATATGTATATACAAATGGATTTAAGTTTCAGCCATCCAAGTGGAGAAAGCTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTAATCTTAGAAACAAATGAGAGACAGCCACAGTTCTCTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTAGAAGTCATGAGAGTTTGTTCTTACATTGCAAATTCTGACAAAAAAGAAGGAATCTCGATCTTCTCTTCAGATGACTATAATAGAGTTTTAAATCTTTCAGAAGAACTAAGCAATGAGGGATTAAGGGTTATAGCAGTAGCTATAAAGAAACTTGGAGAGGAAGCAAGTAATGGAATAAAGACAAGTGAGGAGGGAGACATGATATTCCTTGGCCTAATAACATTTTTCGACCCACCAAAGGCATCGGCGAAAGAAGCACTGCGGCGTTTGGCAGAAAAAGGAGTTGAAGCAAAGGTTTTAACAGGTGATTCACTGTCATTGGCAACAAGAGTATGCACTGAAGTTGGCATAAGAACCAGTGATGTGATAACAGGGCCAGAGCTAGAGCAACTTGACCAAGAAAGTTTCCATGAGACGGTTCAACGCGCCACGGTGCTAGCACGCCTGACGCCAACTCAGAAACTGAGAGTGGTACAGTCCTTGCAGACAGTTGGAAAGCATGTGGTTGGATTCTTGGGAGATGGTGTGAATGACTCTCTTGCCCTTGATGCTGCGAATGTTAGCATTTCAGTGGACTCAGGTGTAGCCATAGCCAAAGACATGGCAGATATCATCTTACTTGAGAAGGATCTGAATGTGCTGGTTGCAGGAGTAGAGCACGGTAGACTCACCTTTGGCAACACAATGAAGTATGTGAAAATGTCAGTTATTGCAAACCTGGGAGGCGTGATTTCACTGCTCATAGCAATCTTGTTCCTCAAGTATGAGCCCTTAACCTCTAAACAGCTCCTCACACAGAACTTGCTCTACAGCGTGGGACAAATCGCCATCCCCTGGGACAAAATGGACGGAGAGTATGTGAAGAGTCCTCAGAAATGGTCAGAGAAAGGGTTGCCAATGTTCATATTGTGGAATGGGCCAGTTTGCACTCTCTGTGACGTGGCAGCACTCTTGTTCCTTTGGTTCTATTACAATATCGGAGCTGATTTGGATGAGAAGTTCTTCCATTCAGCATGGTTCATTGAGGGCCTCCTCATGCAGACTCTCATCATTCACTTGATCAGAACTGACAAAATTCCTTTCATACAGGACATTGCTTCTTCGCCTGTCATGTGCTCCACGCTTGTCATATCTGCAATTGGAATTGCACTTCCATTCACACCTATTGGGAGAATCATGGAATTCACGCTTCTACCCTTCTCCTATTTCGGATTTTTGCTCATTCTTTTTCTTGGATACTTTGTACTTGGCCAGCTCGTTAAGAGACTTTACATATTGCTTTATAAGAGATGGCTTTGA 2655 0.4222 EADGGSQSKEEERVCSWLYTLAHSQKYIAFEYVASTERGNFTEAERRLKENGPNVPLEYSFPRWWHLLWNSLFHPFNMILIVLSAMSFIACDDANGCIMLILVFISVALRFCQEYSSSKAAMKLSELVRCPVKVQRCAGRVVQRELIVQVDHRDIVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTTEKTADIREDQSTPLLDLKNICFMGTSVVSGTGTGLVVSTGSNTYMSTMFSKVGKRKPPDDFEKGLKWIFYLLISVMLVLVTIMFLTDYLTSLNLSNSILFAISVASALNPQMLPLIVNTCLAKGALAMAKDKCIVKSLTAIREMGSMDILCIDKTGTLTMNRAIMVNHVDSKGMPQEQVLRFAFLNSYFKIEQKYPLDDAILAYVYTNGFKFQPSKWRKLDEIPFDFIRRRVSVILETNERQPQFSGRFMVTKGALLEVMRVCSYIANSDKKEGISIFSSDDYNRVLNLSEELSNEGLRVIAVAIKKLGEEASNGIKTSEEGDMIFLGLITFFDPPKASAKEALRRLAEKGVEAKVLTGDSLSLATRVCTEVGIRTSDVITGPELEQLDQESFHETVQRATVLARLTPTQKLRVVQSLQTVGKHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGGVISLLIAILFLKYEPLTSKQLLTQNLLYSVGQIAIPWDKMDGEYVKSPQKWSEKGLPMFILWNGPVCTLCDVAALLFLWFYYNIGADLDEKFFHSAWFIEGLLMQTLIIHLIRTDKIPFIQDIASSPVMCSTLVISAIGIALPFTPIGRIMEFTLLPFSYFGFLLILFLGYFVLGQLVKRLYILLYKRWL 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04129 884 ProSitePatterns E1-E2 ATPases phosphorylation site. 348 354 IPR018303 -
Adu03g04129 884 SFLD Haloacid Dehalogenase 328 674 - -
Adu03g04129 884 Gene3D - 358 528 IPR023299 GO:0000166
Adu03g04129 884 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 534 IPR023299 GO:0000166
Adu03g04129 884 PANTHER CATION TRANSPORTING ATPASE 3 883 - -
Adu03g04129 884 SFLD p-type atpase 328 674 IPR044492 -
Adu03g04129 884 Pfam haloacid dehalogenase-like hydrolase 342 638 - -
Adu03g04129 884 Pfam Cation transporter/ATPase, N-terminus 42 87 IPR004014 -
Adu03g04129 884 SUPERFAMILY Calcium ATPase, transduction domain A 140 245 IPR008250 -
Adu03g04129 884 SUPERFAMILY HAD-like 517 672 IPR036412 -
Adu03g04129 884 Pfam E1-E2 ATPase 140 325 - -
Adu03g04129 884 Gene3D - 343 661 IPR023214 -
Adu03g04129 884 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 20 883 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 3 883 - -
Adu03g04129 884 SUPERFAMILY Calcium ATPase, transmembrane domain M 42 881 IPR023298 -
Adu03g04129 884 Gene3D - 130 234 - -
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 700 711 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 732 745 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 837 858 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 259 275 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 752 768 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 380 393 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 682 697 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 PRINTS Magnesium-transporting ATPase signature 787 808 IPR006415 GO:0015444|GO:0015693|GO:0016021
Adu03g04129 884 Gene3D - 96 834 - -
Adu03g04129 884 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 99 393 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04129 884 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 591 704 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04129 Adu-Chr3 130426630 130429919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04129 52 780 Primary Pumps ATPases(2) AT1G10130 26.826 1.36e-59 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04129 K01531 - gmx:100795153 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04129 03 130426630 130429919 Adu03g04129 03 130426630 130429919 ECH