Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04120 ATGCTGCTGCTGTTGTGTGTTCCGAGTGCCGCTAAGGTTTCGCCTCTGGCCATCAGAAGGCGCGGCGCGGAGGAGTGGCCGAGCGCCGGATCTGACGATCTCGGCGTGTGGCCACTCCCGGAGACTCCAAGAGGGTCCGTGTCTGTGGTGGGGTCATCATCGGAGTTCCAGTTGAAGAGGGAGAAGCTGGCCTTCTACGACAAAGAGTGTTCTCGGATTGCGGAGCACGTGTACCTCGGGAGTGACACGGTGGCCAAGAACCATGACCTGCTCCGGCAGAACGGCATCACTCACGTGCTCAACTGTGTTGGCTTCGTTTGCCCTGAATATTTCAAGCGCGATTTTGTTTACAAGACTCTCTGGTTGCAGGACAGTCCCACAGAAGACATCACCAGCATCCTGTACGATGTTTTCGATTACTTTGAGGAGGTTAGGGAGCAAGGTGGGCGCGTGTTGGTTCACTGCTGCCAAGGGGTTTCGAGATCGACCTCTCTGGTGATCGCGTATCTGATGTGGAGGGAAGGGCAGAGCTTCGAGGACGCGTTTCAGTACGTGAAGAATGCGAGGGGTGTCACCAATCCTAACATGGGTTTTGCGTGTCAGTTATTGCAGTGTCAGAAACGGGTACATGCTACTCCCGCTAGTCCTAATTCCATTCTTCGGATGTATAGAATGGCTCCTCATTCACCTTATGATCCTCTTCATTTGGTTCCTAAGATTGTCAACCACCCCTCTGCACAGGCCCTTGATTCTCGTGGTGCTTTCATTGTGCATGTTCCTTCTGCTATTTATGTTTGGACAGGCAACAACTGCAATTCGGTTATGTCTTCTAATGCAAGAGGCGCGGCATCTCAGGTTGTTCGCTATGAGAGGGCTACGGCTCCTGTTCTTACCATCCATGAGTATGACGAGCCACCGGAGTTTTGGATTGCTCTTGCCTCTGCTGATTGTGACCAGCAGGAGAAGGAGGACACAACCTTGGAAGCTGTTCGTCCTAGGAAGCTTGATGAATATGATTTGGATTATGAGATTTTCCAAAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTCTCTGTGTCTAATGCAGGCTCAGAGACCTGCCTTCCGGCCAGAGAAAGCGGTTGGGGGAGACTGCGCCGGAAACTCGCCAGCGGTTTCATCAAAGGATTGTTCACTTCATCCAAAAGGAACTCTACTAATGAAGAAGCTGCTCTTGTCATGGAAGACTTTGCTGTTAATGTTGATCCCAATGATTGCTCAGGCAGGGAAAAAGGTTATGTTGAAGTGTTGGATCATTTCGTTCCTATTACGGATGTGGATTCATCATTGCCAACATCATCAGATTATCTTCCTTGTTTCACGAGCAGCAGTTCCAAGTCACCAACGCTCTCGCCCTCCAGTTCTGATTATGCAAGTTCATTTACATTTTCACCTTCCTCAACAAATTTGTCTTCTCAGCAGCCATCACCTTCTACTTCTAGCATGGATTCAACCGAAACTATTTATGCCAAAGATGCTTCTGTATTGGACAGTTCCTCTCTGTTTCACAAGAAGGGTGATGTGTTTTTGGCTGATCAAACATCCGGAGGGTCCACCTTCTTTTTGCCATTGAAAGGGTCTATACCCTCCATTGCAGAGCGCAGAGGTAGTAATCCACCACCTCGCATGTTGCTACCTTCTTCAGTCACCGAGTCATCCCATCCTCACAGGAGCAAGATTCATGTAAGATCGAAGTCATTCTCTTTGCCGGAATTGGATGATAACTTGTTAAAGGATGTTGATTGCAAGCAAGCTGATCCTGCTTCATGTAAATAA 1815 0.4909 MLLLLCVPSAAKVSPLAIRRRGAEEWPSAGSDDLGVWPLPETPRGSVSVVGSSSEFQLKREKLAFYDKECSRIAEHVYLGSDTVAKNHDLLRQNGITHVLNCVGFVCPEYFKRDFVYKTLWLQDSPTEDITSILYDVFDYFEEVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKNARGVTNPNMGFACQLLQCQKRVHATPASPNSILRMYRMAPHSPYDPLHLVPKIVNHPSAQALDSRGAFIVHVPSAIYVWTGNNCNSVMSSNARGAASQVVRYERATAPVLTIHEYDEPPEFWIALASADCDQQEKEDTTLEAVRPRKLDEYDLDYEIFQKALAGGVVPPFSVSNAGSETCLPARESGWGRLRRKLASGFIKGLFTSSKRNSTNEEAALVMEDFAVNVDPNDCSGREKGYVEVLDHFVPITDVDSSLPTSSDYLPCFTSSSSKSPTLSPSSSDYASSFTFSPSSTNLSSQQPSPSTSSMDSTETIYAKDASVLDSSSLFHKKGDVFLADQTSGGSTFFLPLKGSIPSIAERRGSNPPPRMLLPSSVTESSHPHRSKIHVRSKSFSLPELDDNLLKDVDCKQADPASCK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04120 604 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 210 IPR029021 -
Adu03g04120 604 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Adu03g04120 604 Pfam Dual specificity phosphatase, catalytic domain 77 207 IPR000340 GO:0008138|GO:0016311
Adu03g04120 604 SMART dsp_5 69 208 IPR020422 GO:0006470|GO:0008138
Adu03g04120 604 ProSiteProfiles Dual specificity protein phosphatase domain profile. 69 211 IPR020422 GO:0006470|GO:0008138
Adu03g04120 604 MobiDBLite consensus disorder prediction 543 578 - -
Adu03g04120 604 Gene3D Protein tyrosine phosphatase superfamily 47 211 IPR029021 -
Adu03g04120 604 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 13 566 - -
Adu03g04120 604 CDD DSP 70 204 - -
Adu03g04120 604 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 189 IPR000387 GO:0016311|GO:0016791
Adu03g04120 604 PANTHER MKPA PROTEIN 13 566 - -
Adu03g04120 604 MobiDBLite consensus disorder prediction 478 498 - -
Adu03g04120 604 Gene3D Severin 221 319 IPR029006 -
Adu03g04120 604 SUPERFAMILY Actin depolymerizing proteins 215 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04120 Adu-Chr3 130326543 130328573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04120 6 105 Protein tyrosine phosphatase (PTP) family AT3G55270 48.673 1.28e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04120 - - lja:Lj6g3v0574850.1 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04120 03 130326543 130328573 Adu03g04120 03 130326543 130328573 ECH
Adu03g04120 03 130326543 130328573 Adu10g00801 10 10883339 10885805 PCT