Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04095 ATGGGTTTGTTTTCTGAAGCACTTGTACTTCATTTTCCCTTATTAATCACCCTCCTCCTTCACAACCATGTGGTTGGGGTATCATATACCACAGATAAACAAACTTTGATCACACTCAAGTCTCAGCTCAGTGATGACACTTCCAACAAACTATCTTCTTGGAACCAGAACACTTCCCCATGCAGCAACTGGACTGGTGTCAAGTGTAACAAACTAAGCCAAAGAGTAACTAGCCTTGATCTTTCAGGGTTAGGACTCTCAGGTCAATTGAGCTCTTCCATTGGCAACCTCATCCGTTTAAGAGTTCTCAACATGAGCTCTAACAATATTGAAGGAGTGATTCCTTCTAACATCACCCTCTTGACTCAGCTCCAGATTCTTGATTTATCATCAAACAAGATTGTGAGCAGAATTCCCACAGACATTGGAAGCTTGAGGAATCTTCAAGTCTTGAAGTTGGGAAAGAATAATCTGCATGGTGCAATTCCAGCTTCTCTGGGAAACATTTCTTCCCTCAGGAATATCAGTCTTGGCACCAATTATCTCAGTGGCTGGATTCCAAGTGACTTGGGAAGGCTCAAGAATCTGATAGAGCTTGATCTCACTATCAACAATCTCACAGGGACTGTTCCATCAGTTATATATAACATAACTTCCCTTGTTAACTTGGCCTTGGCTGCAAACTCCTTCTGGGGTGAGCTTCCTCAAGATGTTGGTCATACACTTCCAAATCTCTTGGTGTTCAACTTCTGCTTCAACAGATTCACCGGTGGGATTCCGGCTTCTCTGCACAACCTCACTAACATTAGGGTCATCCGAATGGCTCACAACCTCTTGGAAGGGACAGTGCCACCTGGTCTAGGAAATTTGCCATTCCTGCGCATGTATAACATTGGATACAACAAGATAGTTAGCTCTCAAGGAAGAGGTTTGGATTACATTATTCATTCTTTGACAAACAGCACCAAACTCAACTTCCTTGCGATGGATGGTAACAGGTTGGAAGGTGTGATTCCTGAAGCCATTGGTAACCTCTCCAAGAATCTCTCAATATTATACATGGGAGGGAATAGAATCAATGGAAGCATACCCTCTTCCATTGGCCATCTTAGTGGCATGAGATTGTTGAACTTGAGCTACAATTTGATCACCGGAGAAATCCCACAAGAGTTAGGCCAATTAGAGGATCTACAAGAGCTGATTCTAGCTGGAAATCAGCTATCTGGTACCATTCCAAAGTCTCTTGGTAATCTCCTTAACTTAAACCAGATTGATCTTTCAAGAAATGAACTTGTGGATACAATACCAAGTAATTTTGGGAACTTTCAAAGCCTGCTCTATATGGACTTATCCAGCAACAAACTCAGTGGAAGCATACCTGGGGAGATACTCAATCTCCAAACTTTGAGCAAGGTTTTAAATTTGTCAATGAACCTCTTGAGTGGACCAATACCTCAAGTTGGGAATTTGATCAGTGTTGCCACCATAGACTTTTCCATCAACAAATTGTATGGTGAGATTCCCAGCTCATTTAGCAATTGCCTGAGCTTGGAAAAATTGTCTCTAGCAAAGAATATGCTTTCAGGTCCCATTCCAAGTACTCTTGGAGATGTGAAAGGTTTGGGAACTTTGGACCTGTCCTGCAACCAACTCTCAGGATCCATTCCTGGTGAACTTCAAAATCTACATGCCCTTCAGCTTTTAAACCTCTCTTATAATGATTTAGAGGGAGCCATTCCTAGTGGTGGAGTATTCCAGAATCTCTCTGCTGTCCATTTAGAAGGTAATACAAAACTCTGCTTGCATTTCTCATGTGTGCCTCATGGCCATGAAAGAAGGACCGTCTACATCATCGTAGCCTTGGTGGTGACATTGATACTATGTCTCACAATTGGCTTGATACTATACATAAAGAACAGAAGAGTCAAGGTAACATCGGCGGCAGCATCTGAGCTGTTAAAGCCTCATGCTCCGATGATCTCTTATGATGAACTTCGTCAGGCAACTGACGAGTTCAGCCAGGAAAATTTAATAGGATCTGGGAGCTTTGGCTCAGTATATCGAGGCCTTCTACGCGAGGGAAGTATTGTTGCTGTGAAAGTGCTTAACATTCTAAGAACTGGTTCTCTGAAGAGTTTCTTTGCTGAGTGTGAGGCTATGAAGAACTCAAGGCACAGAAATCTGGTTAAGGTGATCACATCTTGCTCTAGTGTTGACTTCAAGAACAATGAGTTTCTGgctttggtttatgagtacatgagcaatgggagcttagatgactggattaaagggaggagaaagcatgcaaatggaaatggtttgaagcttatggagagactgaatatagctattgacacagcttgtgcattggattacctgcacaatgatagtgaaattccaattgtgcattgtgatttgaagcctagcaacattctcttggatgatgacatgactgccaaggttggagactttggattggcTAGGTTGCTGATTGAAAGATCAACAAATAATCAAGTCTCCATTAGCTCCACTCATGTCCTTAAGGGTTCAATTGGTTACATTCCACCAGAGTATGGATGGGGAGAGAAACCATCTTCAGCTGGAGATGTGTACAGTTTTGGGATAGTGTTACTTGAGCTGTTCTCCGGGAAGAGCCCGACAGATGAGTGCTTCGCCGGTGGCCTAAGCCTAACAAGATGGGTAGGTCCAAATCCACAACTCTATTGTCTGGATGGAATTCTTGGAGTTGGTCTGTCCTGTGCTGCAGACACCCCAGATGCGAGAATTGGCATTCGAGAAGCTCTTCGCCAACTAAAAGCACTTAGAGACTCTTTTTTGAAGAACAATGACAGTAAGAATGCTGCAGCTACTAGCAAACGTTACTACCAAGTTTCAACAAAATGA 2904 0.3922 MGLFSEALVLHFPLLITLLLHNHVVGVSYTTDKQTLITLKSQLSDDTSNKLSSWNQNTSPCSNWTGVKCNKLSQRVTSLDLSGLGLSGQLSSSIGNLIRLRVLNMSSNNIEGVIPSNITLLTQLQILDLSSNKIVSRIPTDIGSLRNLQVLKLGKNNLHGAIPASLGNISSLRNISLGTNYLSGWIPSDLGRLKNLIELDLTINNLTGTVPSVIYNITSLVNLALAANSFWGELPQDVGHTLPNLLVFNFCFNRFTGGIPASLHNLTNIRVIRMAHNLLEGTVPPGLGNLPFLRMYNIGYNKIVSSQGRGLDYIIHSLTNSTKLNFLAMDGNRLEGVIPEAIGNLSKNLSILYMGGNRINGSIPSSIGHLSGMRLLNLSYNLITGEIPQELGQLEDLQELILAGNQLSGTIPKSLGNLLNLNQIDLSRNELVDTIPSNFGNFQSLLYMDLSSNKLSGSIPGEILNLQTLSKVLNLSMNLLSGPIPQVGNLISVATIDFSINKLYGEIPSSFSNCLSLEKLSLAKNMLSGPIPSTLGDVKGLGTLDLSCNQLSGSIPGELQNLHALQLLNLSYNDLEGAIPSGGVFQNLSAVHLEGNTKLCLHFSCVPHGHERRTVYIIVALVVTLILCLTIGLILYIKNRRVKVTSAAASELLKPHAPMISYDELRQATDEFSQENLIGSGSFGSVYRGLLREGSIVAVKVLNILRTGSLKSFFAECEAMKNSRHRNLVKVITSCSSVDFKNNEFLALVYEYMSNGSLDDWIKGRRKHANGNGLKLMERLNIAIDTACALDYLHNDSEIPIVHCDLKPSNILLDDDMTAKVGDFGLARLLIERSTNNQVSISSTHVLKGSIGYIPPEYGWGEKPSSAGDVYSFGIVLLELFSGKSPTDECFAGGLSLTRWVGPNPQLYCLDGILGVGLSCAADTPDARIGIREALRQLKALRDSFLKNNDSKNAAATSKRYYQVSTK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04095 967 SMART LRR_typ_2 121 145 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 266 290 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 370 394 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 418 441 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 442 466 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 97 120 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 538 561 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 562 587 IPR003591 -
Adu03g04095 967 SMART LRR_typ_2 193 216 IPR003591 -
Adu03g04095 967 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Adu03g04095 967 ProSiteProfiles Protein kinase domain profile. 672 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04095 967 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Adu03g04095 967 Gene3D Ribonuclease Inhibitor 188 309 IPR032675 -
Adu03g04095 967 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Adu03g04095 967 Gene3D Phosphorylase Kinase; domain 1 653 752 - -
Adu03g04095 967 SUPERFAMILY L domain-like 31 305 - -
Adu03g04095 967 Gene3D Ribonuclease Inhibitor 310 605 IPR032675 -
Adu03g04095 967 Gene3D Transferase(Phosphotransferase) domain 1 753 964 - -
Adu03g04095 967 SUPERFAMILY L domain-like 313 600 - -
Adu03g04095 967 SMART serkin_6 672 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04095 967 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Adu03g04095 967 Pfam Leucine rich repeat 348 407 IPR001611 GO:0005515
Adu03g04095 967 PANTHER OS04G0122200 PROTEIN 20 97 - -
Adu03g04095 967 PANTHER OS04G0122200 PROTEIN 93 902 - -
Adu03g04095 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Adu03g04095 967 Pfam Protein kinase domain 673 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04095 967 SUPERFAMILY Protein kinase-like (PK-like) 653 938 IPR011009 -
Adu03g04095 967 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 20 97 - -
Adu03g04095 967 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 93 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04095 Adu-Chr3 130056398 130059393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04095 18 947 Receptor kinase-like Gene Family AT3G47570 41.958 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu03g04095 Pkinase 5.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04095 - - gmx:100783512 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04095 03 130056398 130059393 Adu03g04095 03 130056398 130059393 ECH