Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04086 ATGAAACCTGTTTTTGTGCTTCTCCTAATCTTTCTTGTGGCTCCTACAAGGCCATTCTCATCATCATCATCATCATCATCATCATCATCTCCCACCATTTCCCATAGCAGCAACAACTCTGTATGCCCAGTGGGAATGGATTATGTGCTGACAGTCCCATGGAACTCCTCTAGCTGCCATAACTTCCAACCTTTCCCATCCAAAAACAAAACACGTTCAAGTTTTTGTTGCACTGCTCTGTTATCCCTCTTTGGCATAGCACTTGCTCAAAACCTCAAAGAAAACTCCCTTTTCCAGTTCCCGAATCTTCCCACCATAAAATCCTGCCTTCATCACTTCCAATCCAAGCTCAGTGCTCTCTCACTTCCAAACAACCTTGTTTCCTCTTGTTTTGACCCGCTTCAATTTGTTATCAGTCCCAACCTATGCGCTAACATCCAATCTAAGCAAGACTGGATCAACAATCTTGGTCCTACAACTCGGTTCAACGATGCCTGTAAGCCAGACCTCAGTGTCTCTGCCAACTGCGACATTTGTGTCACAGAAGGTCTAAATGTTCTGCAAAAGATGAATGCTATTGATGGAAATGCTTCTCATTCCCAAGACTGTTTTTATTTTTCAATTCTATATGCTGCTGGAATCGCAAACGAGCTTGGCCCTGAAAGCAGAGGTGCTATGTCTTGTATTTATGAGTTGCCACTTATTAGTGATCAAGGGAGAGGTGCCAGAAGAAGGAGCCATAATCATGCTCTTGTATTTGGTTTAATTGGAGCTTCAATTGGAATCTTGGTTGTGTCTTCCTTGATAGGTTTGTGTCTATGGTACAACAGGTTGGGGACGAGAAAAGCTGCTGAGAATTTGTATGTCTGTGCTGAACTGACAGTGCAAGGGTCTAGGACTCGAGTGAGACCAAATACAGGGTCAACTTGGTTCAAGTTTGAGGACCTAGTGAAGGCCACTAACAATTTTTCAACCCAGAACTTCATTGGCAGAGGTGGTTCTGGCTTAGTTTACAAGGGCATTCTACCTGATGGCACAATCGTTGCAGTTAAAAGGATAGAAGAATCGGATTCTCAAGGAGATGAAGAATTCTACAGGGAGGTGGAGATTATTAGCAACTTGAAACACCGGAATCTAGTGCTGCTAAGAGGGTGTTGTGTGGTTGATAAAGAAGAAGAGGAGGATTCCGGGTACAGAGAAAGCCAAAGATATCTTGTTTATGATTACATGCCAAATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACCGAAATATGAAGAAATCACTTACTTGGTCTCAAAGAAAGAGCATAATCTTGGATGTGGCAAATGGGTTGGTCTATTTGCACTTTGGAGTTAAACCTGCAATCTATCACAGAGATATCAAAACCACCAATATTCTGCTTGATGCAGGTATGAATGCAAGAGTTGCGGATTTCGGGTTGGCTAAACAAAACATTGAAAGTAGGTCTCTGATAAATACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAATTATCTGAAAAGAGTGATGTCTATAGTTTTGGTGTGGTTATACTGGAAATATTGTGTGGAAGAAAAGCTCTTGATTTATCTTCATCTGGAACATCTGCATTCTTTATCTCAGATTGGGTTTGGTCATTGCTGAAATCTGGTAACTTAGAATCAGCTTTGGATGCTTCTATGTTAATAGATGAAAACCTTACTAGTAGGAAAATAATAGAAAGATTCTTAATGGTTGGTGTTCTGTCTTCTCATGTAGTAGCTGATTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTCCAGATAGGCCAATGGCTCTTGCACACCATGTTTTTCCCATAGTTATTTAG 1914 0.4143 MKPVFVLLLIFLVAPTRPFSSSSSSSSSSSPTISHSSNNSVCPVGMDYVLTVPWNSSSCHNFQPFPSKNKTRSSFCCTALLSLFGIALAQNLKENSLFQFPNLPTIKSCLHHFQSKLSALSLPNNLVSSCFDPLQFVISPNLCANIQSKQDWINNLGPTTRFNDACKPDLSVSANCDICVTEGLNVLQKMNAIDGNASHSQDCFYFSILYAAGIANELGPESRGAMSCIYELPLISDQGRGARRRSHNHALVFGLIGASIGILVVSSLIGLCLWYNRLGTRKAAENLYVCAELTVQGSRTRVRPNTGSTWFKFEDLVKATNNFSTQNFIGRGGSGLVYKGILPDGTIVAVKRIEESDSQGDEEFYREVEIISNLKHRNLVLLRGCCVVDKEEEEDSGYRESQRYLVYDYMPNGSLEDHLFSSMDNRNMKKSLTWSQRKSIILDVANGLVYLHFGVKPAIYHRDIKTTNILLDAGMNARVADFGLAKQNIESRSLINTRVAGTHGYLAPEYALYGQLSEKSDVYSFGVVILEILCGRKALDLSSSGTSAFFISDWVWSLLKSGNLESALDASMLIDENLTSRKIIERFLMVGVLSSHVVADSRPTILDALKMLEGDIEIPPIPDRPMALAHHVFPIVI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04086 637 SMART serkin_6 323 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04086 637 ProSiteProfiles Protein kinase domain profile. 323 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04086 637 MobiDBLite consensus disorder prediction 18 38 - -
Adu03g04086 637 Pfam SPARK 37 204 IPR043891 -
Adu03g04086 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Adu03g04086 637 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 36 624 - -
Adu03g04086 637 SUPERFAMILY Protein kinase-like (PK-like) 301 613 IPR011009 -
Adu03g04086 637 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Adu03g04086 637 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Adu03g04086 637 Pfam Protein kinase domain 325 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g04086 637 Gene3D Phosphorylase Kinase; domain 1 290 409 - -
Adu03g04086 637 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04086 Adu-Chr3 129951051 129952964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04086 37 630 Receptor kinase-like Gene Family AT1G11050 57.860 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Adu03g04086 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04086 - - gmx:100788367 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00634 10 7146931 7149276 Adu03g04086 03 129951051 129952964 PCT