Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04081 ATGGATAATAATAATAATATCAAGAAAGAACAAGTTTTCTTACATGGTGACTTGGATATTTATGTAATAGAAGCAAAATCTCTTCCAAACTTGGATCTTTCTTCAGAAGCAGTAAGAAGATGCCTGAGCATGGGGAACTTCTTCACATCACCATTCTCAAAGAAAATGAGGAGTTCAGGGAAAGATAAGATGATAACAAGTGACCCTTATGTCTCTGTAGTCATAGCAGGTGCTACCATAGCTCAAACTAGAGTGATTCCAAACAGCGAAAACCCGATTTGGGACGAGCATTTCATCATGCCGGTTGCTCACCCTGCTCACAAGATTGAGTTCATTGTGAAGGACAATGATGTTCTTGGTGCTGAGTTAATTGGTGTAGTTGATATTCCTGTTCAGAGGGTAGTCTCAGGGGAAAACATAGATGATTGGTTTCCAATCATCGGACAGTACTCTAATTGCTTGCAGGCTTATCCTGAGCTGCATATTTCGATTCAGTTTTGGCCGGTCGGAGGCGTTAAGGATGATATTTGTAGTGGTGATAGTGGAGTTCCTAAGACATATTTTCCATTGAGGAAAGGAGGGAATGTGACTCTGTATCAAGATGCACATGTTCCTGATGGAATGCTACCTGATATTGAATTGGATGGTGGAAAAGTGTTTCAAGCTGGTAAATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCATCATTTGATATATGTTATTGGTTGGTCAGTTTATCATCCAATAAAGCTTGTTAGAGAGCCAACAAGGCCATTGCCTTGTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTACAAATCACAAGAAGGTCTTAGAGTTGTTATGCTCATTTGGGATGACAGAACTTCACATGACAAGTTCCTTATCAAAACTGATGGAGTGATGCAAACTCATGATGAGGAAACCAAAAAGTTCTTTAAAAACTCTGCTGTTCATTGCGTGCTATCTCCGCGTTATGCAAGCAATAAGCTCAGTTGTGGGAACCCTCTTTACTCATCATCAGAAATGTGTGCTTGTGGACTCACAAGATATGATACACCTCAGCATAGGCTATTTCGCGATTTAGAAACCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGACATGCATTGCAAGGTTGAAGGGCCAGCAGCTTATGATATATTAACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAATGGCGAGACTTTAGACTCAACAAGGTCACGAATTGGCACGACGATGCATTGCTAAGGCTAGATCGGATATCATGGATTGTCAGTCCATCTTCGAGTTCTGGTGATGATAAAGCTATCCAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGGATTTCGACAAGGCTCAGTCTCAGAATCTTTTATGTGGAAAGAATTTAAAAGTAGACCAAAGCATTCATACTGCTTATGTTAAAGCAATAAGATCAGCCCAACACTTCATTTATATTGAGAATCAGTATTTTCTGGGCTCATCATATCATTGGCCTTCATATGAAAAAGCAGGTGCAAACCACTTGATTCCAATGGAGTTGGCCTTAAAAATTTCTAGCAAGATCCGAGCAAATGAACGTTTTGCTGTATACATAGTTATACCAATGTGGCCAGAGGGGGTTCCAACAAGTAATGCTGTTCAGGAAATCTTATTCTGGCAGGGACAAACAATGGCTATGATGTATAAGATCATTGCAGATGCACTTAAAGATGCTCAAGTCTCCCATATATATCATCCACATGATTTTCTCAACTTTTTCTGCCTTGGAAATAGAGAACCTGAGGCCACACCAACTCCATCACCACATAGAGAATCATCTGAAAACCGTGGTTTGGGATCAGTCAAGAAATTCAAACGTTTCATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATACGTAATCATTGGATCAGCAAACATTAACCAGAGATCAATGGATGGTTCAAGAGACACAGAAATAGCCATGGGTGCTTATCAACCAAAATATACTTGGAAAGAAAAAAACTGGCATCCACATGGCCAGGTGTATGGATACCGGATGTGGCTGTGGGCCGAGCACCTTGGCAGTCTTGATGACAGATTCAAAGAGCCTCATAGCTTGGAATGTGTAAGGACTATGAACAACATAGCCAAACAAAACTGGAACACATTTGCATCCGATAGAATCAGTCATATGAAAGGGCACTTGATGCTGTATCCAGTTAAGGTTGGCAGAGATGGAAAAGTCACTGCACTTGATAATTGTGATTCATTTCCTGATGTTGGTGGCAAAATTCTTGGAGCTGCAAATTCTCTTCCAGACACCTTAACCACATGA 2448 0.4056 MDNNNNIKKEQVFLHGDLDIYVIEAKSLPNLDLSSEAVRRCLSMGNFFTSPFSKKMRSSGKDKMITSDPYVSVVIAGATIAQTRVIPNSENPIWDEHFIMPVAHPAHKIEFIVKDNDVLGAELIGVVDIPVQRVVSGENIDDWFPIIGQYSNCLQAYPELHISIQFWPVGGVKDDICSGDSGVPKTYFPLRKGGNVTLYQDAHVPDGMLPDIELDGGKVFQAGKCWEDICHAILEAHHLIYVIGWSVYHPIKLVREPTRPLPCGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLIKTDGVMQTHDEETKKFFKNSAVHCVLSPRYASNKLSCGNPLYSSSEMCACGLTRYDTPQHRLFRDLETVYKEDFHNPTFQVGSSGGGPREPWHDMHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLNKVTNWHDDALLRLDRISWIVSPSSSSGDDKAIQVTDENDPETWNVQVFRSIDSGSVKGFPKDFDKAQSQNLLCGKNLKVDQSIHTAYVKAIRSAQHFIYIENQYFLGSSYHWPSYEKAGANHLIPMELALKISSKIRANERFAVYIVIPMWPEGVPTSNAVQEILFWQGQTMAMMYKIIADALKDAQVSHIYHPHDFLNFFCLGNREPEATPTPSPHRESSENRGLGSVKKFKRFMIYVHAKGMIVDDQYVIIGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKNWHPHGQVYGYRMWLWAEHLGSLDDRFKEPHSLECVRTMNNIAKQNWNTFASDRISHMKGHLMLYPVKVGRDGKVTALDNCDSFPDVGGKILGAANSLPDTLTT 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04081 815 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 169 IPR035892 -
Adu03g04081 815 PANTHER PHOSPHOLIPASE D 352 815 IPR015679 -
Adu03g04081 815 PANTHER PHOSPHOLIPASE D 9 335 IPR015679 -
Adu03g04081 815 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 661 688 IPR001736 GO:0003824
Adu03g04081 815 SMART C2_3c 17 143 IPR000008 -
Adu03g04081 815 Pfam C2 domain 16 146 IPR000008 -
Adu03g04081 815 SUPERFAMILY Phospholipase D/nuclease 183 422 - -
Adu03g04081 815 Gene3D Endonuclease Chain A 352 436 - -
Adu03g04081 815 SUPERFAMILY Phospholipase D/nuclease 507 746 - -
Adu03g04081 815 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Adu03g04081 815 PANTHER PHOSPHOLIPASE D 352 815 - -
Adu03g04081 815 PANTHER PHOSPHOLIPASE D 9 335 - -
Adu03g04081 815 SMART pld_4 661 688 IPR001736 GO:0003824
Adu03g04081 815 PIRSF PLD_plant 3 346 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Adu03g04081 815 PIRSF PLD_plant 344 815 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Adu03g04081 815 CDD C2_plant_PLD 12 166 - -
Adu03g04081 815 Gene3D C2 domain 12 166 IPR035892 -
Adu03g04081 815 Pfam PLD-like domain 603 697 IPR025202 -
Adu03g04081 815 Gene3D Endonuclease Chain A 465 718 - -
Adu03g04081 815 Pfam Phospholipase D C terminal 735 805 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04081 Adu-Chr3 129894103 129897652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04081 12 814 Phospholipase D Gene Family (Wang group) AT2G42010 50.985 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04081 K01115 - gmx:100779740 1290.79