Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04043 ATGGATATCGAGGAAGACATCCGTTCTTTGCAGCTTGACTCAGCAGAAGACAATAATGGGGTGGTAATTCCAGATGATGTAAAGCCAGAAGAAGTTGATAAATCTGAAAAGATTGAAGAAATTGAGAAATCTAATGAGATGGATGAAGTGAGAAATAGAGAAATTCATCCTGTACAAGATCAAGAAGATGAGCTTGACAACCGAAAAAGGCACTTGAATGTTGTATTCATTGGCCATGTTGATGCTGGTAAGTCAACAACCGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAAAGGACTATACAGAAATATGAGAAAGAAGCTAAAGATAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGAGTGAAGGGAAAAACAGTTGAAGTTGGAAGAGCTCATTTTGAGACAGAGTCAACACGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCTGATGTTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTTGTTGTAAATAAAATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGATACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGTCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGACCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCTGGTGAAAATTTACGGATTAGGTTATCAGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTTCTGTCTAGTGTTGCAAATCCAGTGCCAACTGTTACTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTTGCGGTTGGGAAAGTCACTGGTGTGTGA 1488 0.4039 MDIEEDIRSLQLDSAEDNNGVVIPDDVKPEEVDKSEKIEEIEKSNEMDEVRNREIHPVQDQEDELDNRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVSNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTGV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04043 495 CDD eRF3_C_III 387 493 - -
Adu03g04043 495 PANTHER BNAA06G12300D PROTEIN 64 489 - -
Adu03g04043 495 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 69 294 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 MobiDBLite consensus disorder prediction 23 49 - -
Adu03g04043 495 Pfam Elongation factor Tu C-terminal domain 386 495 IPR004160 -
Adu03g04043 495 CDD EF1_alpha 73 293 - -
Adu03g04043 495 Gene3D - 49 293 IPR027417 -
Adu03g04043 495 SUPERFAMILY Translation proteins 292 385 IPR009000 -
Adu03g04043 495 PANTHER TRANSLATION FACTOR 64 489 - -
Adu03g04043 495 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 389 494 IPR009001 -
Adu03g04043 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 304 IPR027417 -
Adu03g04043 495 Gene3D Translation factors 298 383 - -
Adu03g04043 495 PRINTS GTP-binding elongation factor signature 73 86 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 PRINTS GTP-binding elongation factor signature 168 179 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 PRINTS GTP-binding elongation factor signature 212 221 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 CDD eRF3_II 300 381 - -
Adu03g04043 495 Pfam Elongation factor Tu GTP binding domain 69 275 IPR000795 GO:0003924|GO:0005525
Adu03g04043 495 MobiDBLite consensus disorder prediction 1 49 - -
Adu03g04043 495 Gene3D Translation factors 388 495 - -
Adu03g04043 495 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 125 140 IPR031157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04043 Adu-Chr3 129488337 129497283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04043 65 495 Eukaryotic Initiation Factors Gene Family AT5G60390 37.097 2.85e-95 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04043 K03267 - gmx:100784412 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04043 03 129488337 129497283 Adu03g04043 03 129488337 129497283 ECH
Adu10g00022 10 387306 389622 Adu03g04043 03 129488337 129497283 PCT