Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04018 ATGGGTAAGAAGAAGAAGAGGGTTGCGTCCAAGGTGTGGTGCTATTACTGCGATCGCGAATTCGACGACGAGAAGATCTTGGTGCAGCATCAGAAGGCCAAGCACTTCAAGTGCCATGTATGCCACAAGAAGCTCTCCACCGCCGGCGGTATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCGAATGCGAAACCTGGTAGAGAGAGTACAGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATGTCTTGGCTGCTCATTATGGAGAAGAAGATGATGATGTTCCATCAAAGGCAGCAAAGGTGGACATACCATCAACACAGCTTGTAGGTGGAATGGTGCCACCTCCTTTGGGTACAGGATATCCTCCTCGACCAGCGGTACCGCCAATGTATAATCCAGCGGTGCCTGTCCCCCCAAATGCTTGGGCTGTTCCACCTCGACCGGCTCAGCCATGGTATCCCCAACCTCCATCTGTTTCGATTCCACCACCGGCTCCTTACGCACAACAGCCATTATTCCCCGTGCAGAACGTGAGACCGCCACTGCCATCAACTGCTCCTTCTCCACTCCAAACTCAGGTTACTCCTCCTGGGATGCCTTCATCTACACCTTCTGTCCCTGTTTCGCAACCTTTGTTTCCTGTTATTACAACTCAAAGTTCAACATTTTCTCCTGCTCCTCTATCTTCAAGTGCTCCATCCATAAATCCAGTGATATCCTCAAGTGCCCCTGTTGATTCCCATTTGGGTGCCAACTCTGTTGTAAATGCTTATCAGGCAATAGGGATTCCAGGTGGGACAGCAGGTAACTCACATTCCTATGCATCTGGTCCAAATACCGGTGGCCCTTCTATCGGACCTCCCCCGGTAATTGCAAACAAAGCTCCTGCGCCTCAGCCTGCTGCTAATGAAGTCTACTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTCTGCCAAAATATCAGGTTCATGATGAAACTAGCCAGATGAGCTCAATTGATGCAGCAATAGATAAGAGGATACTTGAAAGCAGGTTGGCTGGTCGCATGGCGTTCTAG 1098 0.4991 MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEDDDVPSKAAKVDIPSTQLVGGMVPPPLGTGYPPRPAVPPMYNPAVPVPPNAWAVPPRPAQPWYPQPPSVSIPPPAPYAQQPLFPVQNVRPPLPSTAPSPLQTQVTPPGMPSSTPSVPVSQPLFPVITTQSSTFSPAPLSSSAPSINPVISSSAPVDSHLGANSVVNAYQAIGIPGGTAGNSHSYASGPNTGGPSIGPPPVIANKAPAPQPAANEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSIDAAIDKRILESRLAGRMAF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04018 365 MobiDBLite consensus disorder prediction 196 214 - -
Adu03g04018 365 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Adu03g04018 365 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Adu03g04018 365 PANTHER ZINC FINGER PROTEIN 207 1 365 - -
Adu03g04018 365 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 365 - -
Adu03g04018 365 SMART c2h2final6 12 35 IPR013087 -
Adu03g04018 365 SMART c2h2final6 36 59 IPR013087 -
Adu03g04018 365 MobiDBLite consensus disorder prediction 188 214 - -
Adu03g04018 365 Gene3D Classic Zinc Finger 2 66 - -
Adu03g04018 365 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04018 1 365 C2H2 Transcription Factor Family AT1G30970 62.371 2.13e-141 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g04018 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04018 - - gmx:100789368 553.903