Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04000 ATGTTGGGCAGTtcttcttcttctcctcctcctgcaatgaagcatgatgtgtttatcagcttcagagggaaggatactcgcaatcagataggaagttatgaacaaccatttgagaagcaccaacagcgatacgaagacaaagtgcagggatggagatctgctctataccaagcagctaatctctccggatgggattcACGAGCATTCAGACCTGAATCCATTCTTGTTGAAGAGATTGTGGAAGATATTTGGACAAAATTGAATAGTCAATCCATTAATGATAATGGAGGACTTGTTGGAATTGACAAGCATATTGAACAAGTTGAGTCCATCTTGCATGGTGATTCAGCAGATTTTCGGATCGTAGGGATTTGGGGCATGAGAGGAATAGAGCATACTGCAAAACAAAAACTTAATGACTCTGGTTTCTCGGCTACCATTGGAATAGAAGTTCTCAAGGAGAGGTGTCTCATATCTGTTTTGAATCGGGAGATTGTGATGCATGACCTAATACAAGATATGGGACAAGAAATCATCCGTCGTCAAGGTGTCAAGGATCCTGGAAAACGCAGTCGATTATTTAAGCATCAGGACATTTATCAAGTTTTAAAAAAGAAAAAGGGGACAGAAGCAATCCAATGTATTGTGCTTGACATGTGCAAAATTAGAGAAGTTAACATACATTCCAAAACCTTCAAAATGATGCATAAACTGAGAATGCTCCAATTCTACACGTCAAAGTCAGCAAAAGACTCAAATGTACACATTCCTAAATTTCTTAAAAGTCTTCCGGATGAGCTAAGATTTCTTCGTTGGGATGGTTTCCCTCAAATATCTTTGCCACAGGACTTTTGCCCAGAAAATCTTGTTGAACTCAATATGCGTGATAGCCATCTTGAACGACTCTGGGACGGACATCAGGATTTACCAAATTTGAAAAGGCTTGACCTCAGTGGTTCTCGGAAGCTGATTCAAATACCAGACCTCTCGCAGTCTCCAAATATTGAAGAAATAATTCTTAGTCATTGTGTAAAGTTGGATGTCGTTTACTCCTCTAGTTTCCTCGCCAAGCTCAGCTGCTTATGGTTGAATGGTTGTTATGAGCTTAGGATTTTAAATCTTCCTAGTAGTATCCTATTGGAATCTCTTGGTGTAATAGTTCTTTGTGACTGTCCTAGCCTTGAGATGTTTTCAGTCAGTAAAACAAGTGAGGGAGTTCTACCATTTGGCTGTTTGCGTCATGGAAAACTCAGATGCAATGAGAAGAAGAAGGAAGAAGAGAAGCGTGCATGA 1293 0.338 MLGSSSSSPPPAMKHDVFISFRGKDTRNQIGSYEQPFEKHQQRYEDKVQGWRSALYQAANLSGWDSRAFRPESILVEEIVEDIWTKLNSQSINDNGGLVGIDKHIEQVESILHGDSADFRIVGIWGMRGIEHTAKQKLNDSGFSATIGIEVLKERCLISVLNREIVMHDLIQDMGQEIIRRQGVKDPGKRSRLFKHQDIYQVLKKKKGTEAIQCIVLDMCKIREVNIHSKTFKMMHKLRMLQFYTSKSAKDSNVHIPKFLKSLPDELRFLRWDGFPQISLPQDFCPENLVELNMRDSHLERLWDGHQDLPNLKRLDLSGSRKLIQIPDLSQSPNIEEIILSHCVKLDVVYSSSFLAKLSCLWLNGCYELRILNLPSSILLESLGVIVLCDCPSLEMFSVSKTSEGVLPFGCLRHGKLRCNEKKKEEEKRA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04000 430 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 134 - -
Adu03g04000 430 Pfam TIR domain 18 99 IPR000157 GO:0007165
Adu03g04000 430 Pfam Leucine Rich Repeat 288 307 IPR011713 -
Adu03g04000 430 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 138 400 IPR044974 GO:0006952
Adu03g04000 430 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 134 IPR044974 GO:0006952
Adu03g04000 430 Gene3D Ribonuclease Inhibitor 184 405 IPR032675 -
Adu03g04000 430 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 138 400 - -
Adu03g04000 430 Gene3D - 24 95 IPR035897 -
Adu03g04000 430 SUPERFAMILY "Winged helix" DNA-binding domain 144 204 IPR036390 -
Adu03g04000 430 SUPERFAMILY L domain-like 166 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04000 Adu-Chr3 129124946 129127796 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04000 138 397 WRKY Transcription Factor Family AT4G12020 38.889 8.58e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04000 - - adu:107481402 357.066