Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03992 ATGGCCGCCAACAACAATCCGCATTCTCTCACTGATCAGAATGCGAATTCTATGCTTCCGCCTATTCTTGATCATCAATTCTCCACTACCCCTGCTCTTAGGCTTCTGGTCGTTGATCATGATCCTGAACACTTAAGACTTATTCAAGATATGGCTTTTCAATGCAACTATCAAGTGACCACATGCTTCGAGGGTTCTCATGCTTTGAATCTTCTTCGGGAGAGCAGTGGGTGCTTCGATGTGGTACTATGTGATGTTCATATGCCAGGGATAATGGATGATGGTTCTCGGTTACTTGACCATGTTCTCCAAGAATTCAATATTCCTGTCGTAATGATGTGTGCAACAGATGATGAGTCATCAAGTGCAGTGATGGAGGGTATGAAAAAGAAAGGGGCTTGTTATAATTTAGTTAAACCTCTTAGCGAGCAAGATTTGAGGAACATGTGGCAGAATGTGGTGGAGAAAACCCAGAAAGAAGTTTGCTATGATGATGATGAGAGCAAAGGAACAGTTAATAGAAGGAAGAGGAGCTTATCAACGGAAAGAGACGATCATGATCATGATGTTCAGTCCAACACTCCTAACAAGAAGCCACGTTTTATTTGGACCCCAGAAAGGCATCAAATGTTCGTCGATGCTGTACTCCAACTAGGGATTGATAAAGCTGTGCCAAAGAAAATTCTAGAATTGATGGATATCCCTGACTTGACAAGGGAAAATGTAGCAAGCCATCTCCAGAAATATCGGATGCATCTTAAGCAGAAGAGTGAGGAGACTATGCAAACAAATATTATTGGGAAGCTAAATGTTAATAGAGAAGCTAATAAGCAACTTTGTGCACCATTGAGGGTTCAAGCTACAACCAACGTTCCTCAAATTCCACAAACACTGCCTCTTCATCACCAATATTATTCTTCATTATCTGTGCCAACTGTTAGTGCTGCACCTCATGCTTTGAAATTCCTTAATAGTAACTCCTTTGGTCTCATCAACAACAATGGCATTGTTGGAAGTAACATGGTACTTAATCATCAGAATAATGACTATGGTCGTTATATTACTATGAACCTAATGCAACAGCAACAGCACCAACAGCTACAGTCACCGGTGCAAAATCACTACCATCATCGTAATCAAAGTCATTATTATCCAATGATGGCTCCTCAATCCGGTGATGGAGCTGCTTTTCAAGGGGTAACGAGGGGAGGTAGTGGTGGCTGTAGGAGTGATCCTCTTGTTGAATACAATACATTTTCTTCATCATCATCAGCATCACTTGATCATTATCATCATCAAATGAATAATAATTCGGTCAGCGGAAGTGGCAGCATTGCTGAGATTCTGAATGATGGCTATATATCATCATCAGCACCACCCTCATCATCATCGTCCCTTTCTCCAACAGGATTCTTCTCAAGAACTCACCACCAGCACAATCATCAGCAGCTTCCAGCCGGGGACCTTGACGACAATTTTTGGGACGGCCTATATACTCTTTGA 1503 0.4178 MAANNNPHSLTDQNANSMLPPILDHQFSTTPALRLLVVDHDPEHLRLIQDMAFQCNYQVTTCFEGSHALNLLRESSGCFDVVLCDVHMPGIMDDGSRLLDHVLQEFNIPVVMMCATDDESSSAVMEGMKKKGACYNLVKPLSEQDLRNMWQNVVEKTQKEVCYDDDESKGTVNRRKRSLSTERDDHDHDVQSNTPNKKPRFIWTPERHQMFVDAVLQLGIDKAVPKKILELMDIPDLTRENVASHLQKYRMHLKQKSEETMQTNIIGKLNVNREANKQLCAPLRVQATTNVPQIPQTLPLHHQYYSSLSVPTVSAAPHALKFLNSNSFGLINNNGIVGSNMVLNHQNNDYGRYITMNLMQQQQHQQLQSPVQNHYHHRNQSHYYPMMAPQSGDGAAFQGVTRGGSGGCRSDPLVEYNTFSSSSSASLDHYHHQMNNNSVSGSGSIAEILNDGYISSSAPPSSSSSLSPTGFFSRTHHQHNHQQLPAGDLDDNFWDGLYTL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03992 500 ProSiteProfiles Response regulatory domain profile. 34 154 IPR001789 GO:0000160
Adu03g03992 500 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 30 383 - -
Adu03g03992 500 SUPERFAMILY CheY-like 33 157 IPR011006 -
Adu03g03992 500 Gene3D - 194 256 - -
Adu03g03992 500 MobiDBLite consensus disorder prediction 164 200 - -
Adu03g03992 500 SMART REC_2 33 150 IPR001789 GO:0000160
Adu03g03992 500 Pfam Response regulator receiver domain 36 149 IPR001789 GO:0000160
Adu03g03992 500 Gene3D - 32 169 - -
Adu03g03992 500 MobiDBLite consensus disorder prediction 456 487 - -
Adu03g03992 500 MobiDBLite consensus disorder prediction 456 482 - -
Adu03g03992 500 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 254 IPR017930 -
Adu03g03992 500 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 383 IPR045279 GO:0009736
Adu03g03992 500 MobiDBLite consensus disorder prediction 164 194 - -
Adu03g03992 500 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 252 IPR006447 GO:0003677
Adu03g03992 500 SUPERFAMILY Homeodomain-like 196 254 IPR009057 -
Adu03g03992 500 CDD REC_typeB_ARR-like 36 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03992 Adu-Chr3 129078792 129080676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03992 32 416 Response Regulator Gene Family AT5G58080 34.625 1.96e-47 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g03992 Response_reg 1.2e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03992 - K14491 adu:107481405 1001.5