Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03983 ATGGCTGAGCGCGGTGGCGGAGATCGTGGCGGATTCGGGCGTGGCTTCGGAGGTCGCGGTGGTCGGGGCGACAGGGGCCGCGGTGGGCGTCGTAGGGGCGGTGGACGCCGCGAGGAAGAGGAGAAGTGGGTTCCAGTCACGAAGCTGGGTCGCCTCGTGAAAGATTCAAAGATCAGTAGCCTCGAACAAATCTACCTTCACTCTCTCCCAATCAAGGAGCACCAAATCGTTGACCAGTTGGTTGGTCCTTCTTTGAAGGATGAAGTCATGAAGATCATGCCCGTTCAGAAACAGACACGTGCCGGTCAGAGAACCCGTTTCAAGGCCTTCGTTGTCGTCGGTGACAACAACGGCCACGTCGGACTCGGTGTCAAGTGCAGCAAGGAGGTCGCAACCGCCATTCGCGGTGCCATCATATTGGCGAAGCTCTCGGTGATTCCTGTTAGGAGAGGTTATTGGGGTAACAAGATCGGAAAGCCACACACCGTTCCCTGCAAGGTCACCGGGAAATGTGGTTCCGTCACCGTCCGTATGGTGCCTGCTCCTCGTGGTTCTGGAATTGTTGCTGCTAGGGTTCCCAAGAAGGTCTTGCAATTTGCAGGGATTGATGATGTATTCACTTCTTCTAGAGGATCCACCAAGACCCTTGGAAATTTCGTGAAGGCCACATTCGAGTGTTTGCTGAAAACCTACGGTTTCCTTACACCTGATTTCTGGAGGGAGACTCGCTTCTCCAAATCTCCATTCCAAGAGTACACTGATTTCCTTGCCAAGCCAACGGCCAAGGCCCACATCTTGGAGGATGAAAAGGTCGAGGCTTAA 822 0.5438 MAERGGGDRGGFGRGFGGRGGRGDRGRGGRRRGGGRREEEEKWVPVTKLGRLVKDSKISSLEQIYLHSLPIKEHQIVDQLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSKSPFQEYTDFLAKPTAKAHILEDEKVEA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03983 273 ProSiteProfiles S5 double stranded RNA-binding domain profile. 85 148 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu03g03983 273 MobiDBLite consensus disorder prediction 20 41 - -
Adu03g03983 273 PANTHER 40S RIBOSOMAL PROTEIN S2-1-RELATED 1 271 - -
Adu03g03983 273 TIGRFAM uS5_euk_arch: ribosomal protein uS5 38 245 IPR005711 GO:0003735|GO:0006412|GO:0015935
Adu03g03983 273 Pfam Ribosomal protein S5, N-terminal domain 85 149 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu03g03983 273 Gene3D - 42 147 - -
Adu03g03983 273 Gene3D - 148 240 IPR014721 -
Adu03g03983 273 SUPERFAMILY dsRNA-binding domain-like 81 150 - -
Adu03g03983 273 Pfam Ribosomal protein S5, C-terminal domain 169 240 IPR005324 GO:0003735|GO:0005840|GO:0006412
Adu03g03983 273 ProSitePatterns Ribosomal protein S5 signature. 102 134 IPR018192 -
Adu03g03983 273 MobiDBLite consensus disorder prediction 1 41 - -
Adu03g03983 273 SUPERFAMILY Ribosomal protein S5 domain 2-like 161 241 IPR020568 -
Adu03g03983 273 PANTHER RIBOSOMAL S SUBUNIT 1 271 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03983 Adu-Chr3 129002131 129003569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03983 39 272 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 86.017 4.03e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03983 K02981 - gmx:100797105 458.759