Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03978 ATGAGGCTAGGTTTGAAGCTGCTTCAAGAAAGAGCTAAAGTTGGATCCTTTTGGTGGCCATACATCAGCAATCTCCCGGAAACATACACTGTCCCTATCTTCTTTCCCGGAGAGGATATAAAGAACTTGCAGTATGCTCCTCTTCTTCACCAGGTGAACAAAAGATGTCGGTTTCTTCTTGATTTTGAGCAAGAAGTCAAGCATGCCTTAGTCAATCTCACACCAGATAAGCATCCTTTTGGTGGCCAAGAAGTAGATGCATCTTCTCTTGGATGGGCTATGTCAGCAGTCTCATCAAGAGCATTCCGTTTATATGGTGACAAACAGCCAGATGGGATCCATATTGACATACCTATGATGCTCCCTCTGATTGATATGTGCAATCATAGTTTCAATCCAAATGCCAGAATTGTTCAGGAAAAAGACTCTAGTAGCAAAAAAATGCAAGTGAAGGTTGTGGCTGAGACAGCAATCAAAGAAGATGATCCTTTATTACTTAACTATGGCTGTCTAAACAATGATTTTTTCCTTCTTGATTATGGATTTGTGATACAATCAAACCCGTATGACTGCATTGAACTGAAATACGATGGTGCTCTTTTGGATGCTGCAAGCTCAGCAGCTGGAGTTTCATCACCAAATTTCTCAGCACCTGCTCCATGGCAGGAACAGATTCTTGCTCAGCTAAATCTTGCTGGGGAAGCTTCAGATCTCAAGGTGAGCATTGGTGGTGAAGATGTAGTAGAGGGGCGTTTGTTGGCTGCATTGAGAGTACTCCTTTCAAGTAGTATGGAAACCGTGCGGAAGCATGACCTCAACACACTCAAGTCTTTATCAGCCGAAGCCCCGCTGGGTGTTGCAAATGAGACAGCTGTCTTACGTACGCTTATAGCTCTGTGTGTGATTGCACTGGGACACTTCCCCACCAAAATAATGGATGATGAATCACTGCTGAAACAGGGTGCCTTAGGTTCAACGGAATTGGCCATTCAATACAGAATCCAAAAGAAATATGTGATTGTTGATGCCATGAGATCTCTCTCAAGGAGGGTAAAGCTTCTCTCTTTCAAGGAAACAACAGTGAGTGCCGAAGGCTAA 1098 0.4344 MRLGLKLLQERAKVGSFWWPYISNLPETYTVPIFFPGEDIKNLQYAPLLHQVNKRCRFLLDFEQEVKHALVNLTPDKHPFGGQEVDASSLGWAMSAVSSRAFRLYGDKQPDGIHIDIPMMLPLIDMCNHSFNPNARIVQEKDSSSKKMQVKVVAETAIKEDDPLLLNYGCLNNDFFLLDYGFVIQSNPYDCIELKYDGALLDAASSAAGVSSPNFSAPAPWQEQILAQLNLAGEASDLKVSIGGEDVVEGRLLAALRVLLSSSMETVRKHDLNTLKSLSAEAPLGVANETAVLRTLIALCVIALGHFPTKIMDDESLLKQGALGSTELAIQYRIQKKYVIVDAMRSLSRRVKLLSFKETTVSAEG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03978 365 SUPERFAMILY SET domain 3 187 IPR046341 -
Adu03g03978 365 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 1 360 - -
Adu03g03978 365 CDD SET_LSMT 1 183 - -
Adu03g03978 365 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 179 353 IPR036464 -
Adu03g03978 365 Pfam Rubisco LSMT substrate-binding 217 339 IPR015353 -
Adu03g03978 365 Gene3D set domain protein methyltransferase, domain 1 1 183 - -
Adu03g03978 365 Gene3D - 214 356 IPR036464 -
Adu03g03978 365 Pfam SET domain 20 169 IPR001214 GO:0005515
Adu03g03978 365 PANTHER F21J9.27 1 360 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu03g03978 SET 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03978 - - gmx:100778387 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03978 03 128910552 128913755 Adu03g03978 03 128910552 128913755 ECH