Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03923 ATGGCTACTGTGTTCTCAGTGTGTTCGGGTTCTTCTGCTTTTCTCTCTCCATGCACTTCGCACACCAGGTGTTTGTCTCTTTTACCCAAAGGATCACCACTTCTTCACCACATCAAGAAACCTTTTTCTGTGAAATCCCTTTCTTCTTTGGAAACTCAAGAAGTATCATCAGTATCAGTGTCACCAGCAGTTACCACCTTCTGGCAATGGCTTAAGGAAGAAGGTGTTATCTCTTCAAAGACACAAGTGAAACCTGGTGTGGTCCCTGAAGGCCTTGGACTTGTTGCAACCAAAGACATATCAAGAAACGAGGTTGTTCTTCAGGTTCCAAAGAGGTTTTGGATTAACCCAGATGCAGTTGCTGCTTCTGAGATTGGGAATGTGTGTAGTGGTCTCAAGCCATGGCTTTCTGTTGCTTTGTTCCTCATTAGGGAGAGGTCAAGGGATGATTCACTTTGGAAGCACTACTTCCCTGTTCTGCCAAAAGAAACTGATTCTACTATATACTGGTGGGTTTCTTTTGTTTTTGTTTTTTGTACTCAACTTCTGAACACAACATTGGGTGTGAAAGAGTATGTTCAGAATGAATTTATGAGACTGCAAGAAGAAATCATACTCCCTAACAAGAAGCTTTTTCCTTTTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGACTTCGCAACGAAAATCTGGTTGTTATTCCATTAGCAGACTTGATAAACCACAGTGCAAGAGTAACTACAGAAGATCATGCTTATGAAGTTAAAGGAGCTGCAGGCCTTTTCTCTTGGGATTACTTATTTTCCCTAAGAAGCCCCCTTTCTGTCAAGGCTGGGGAACAGATATATATCCAATATGATTTGAACAAAAGCAACGCCGAGTTGGCTCTGGACTATGGCTTCATCGAACCAAATTCTGACCGTAATGCATATACCTTGACACTTGGAATACCTGAGTCCGACCCTTTCTATGATGACAAACTAGACATTGCAGAGACCAATGGTTTTGGTGAGACAGCATACTTTGACATATTCTACAACCAACCACTTCCACCAGGGATGATTCCATACCTGAGACTTGTAGCTCTAGGAGGTACTGATGCTTTCCTACTGGAAGCGCTATTCAGAAACACTGTCTGGAGTCATCTAGAATTGCCAGTGAGCCGTGACAATGAGGAACTTTTATGCAGGGTGGTTAGAGAGGCCTGCAAATCTGCTCTTGCTGGTTATCATACAACCATTGAAGAGGATAACAAGTTAAAGGAAGCAAAATTAGATTCAAGACTTGCAATAGCAGTCGGAATAAGAGAAGGGGAGAAGAAAGTTCTGCAACAAATTGATGAGGTCTTCAAGGAGAAAGAATTGGAACTGGACCAGTTAGAGTATTACCAAGAAAGGAGGCTCAAGGACCTTGGCCTGTGCGGCGAAAGTGGTGATATACTAGGGGACCTTGAGAAGTTCATGTAA 1497 0.4255 MATVFSVCSGSSAFLSPCTSHTRCLSLLPKGSPLLHHIKKPFSVKSLSSLETQEVSSVSVSPAVTTFWQWLKEEGVISSKTQVKPGVVPEGLGLVATKDISRNEVVLQVPKRFWINPDAVAASEIGNVCSGLKPWLSVALFLIRERSRDDSLWKHYFPVLPKETDSTIYWWVSFVFVFCTQLLNTTLGVKEYVQNEFMRLQEEIILPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSVKAGEQIYIQYDLNKSNAELALDYGFIEPNSDRNAYTLTLGIPESDPFYDDKLDIAETNGFGETAYFDIFYNQPLPPGMIPYLRLVALGGTDAFLLEALFRNTVWSHLELPVSRDNEELLCRVVREACKSALAGYHTTIEEDNKLKEAKLDSRLAIAVGIREGEKKVLQQIDEVFKEKELELDQLEYYQERRLKDLGLCGESGDILGDLEKFM 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03923 498 ProSiteProfiles SET domain profile. 74 297 IPR001214 GO:0005515
Adu03g03923 498 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 37 496 IPR011192 GO:0009507|GO:0030785
Adu03g03923 498 Pfam SET domain 91 296 IPR001214 GO:0005515
Adu03g03923 498 Pfam Rubisco LSMT substrate-binding 328 453 IPR015353 -
Adu03g03923 498 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 44 490 - -
Adu03g03923 498 SUPERFAMILY SET domain 61 318 IPR046341 -
Adu03g03923 498 SMART set_7 79 303 IPR001214 GO:0005515
Adu03g03923 498 PIRSF RMT_SET 1 497 IPR011192 GO:0009507|GO:0030785
Adu03g03923 498 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 44 490 - -
Adu03g03923 498 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 320 491 IPR036464 -
Adu03g03923 498 CDD SET_RBCMT 83 312 IPR044431 GO:0016279|GO:0018022
Adu03g03923 498 Gene3D - 313 477 IPR036464 -
Adu03g03923 498 Gene3D set domain protein methyltransferase, domain 1 60 312 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu03g03923 SET 6.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03923 K00592 - gmx:100818113 790.03