Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03920 ATGGCACCTTCTGCTTCATTGATGAAAGCTTGCAATGTCAATACCCTTTCAGTTCCTATTTTCAAACCATGCACAAACCCTTCATCATCATCACGTGTGTTCTTCTCAAAATCCATCATCGAACTGACACTTCATATCTCAAATTCTGGCCATAATAATCATCACAGTAACAATAACTTCCCACTATTATCATTCCCGAGTTGTTCATCAAAACCAGATATCAGCACAGACAGTAGTGACATAGAAAACAAACCAAAGGGTAGTAGTGAACAGAGCTCATTAGTTTCTAAACGCCAAAAGGCTTCGAAACTAGATAAAAATCATGCAAGTGAATCACTCACTACTTCTCCTGCAAAGTCCTCGTCGTCTTCTTCTTCACCATCCAGAGGATTGGTGTTTAGTTTAGGTCCTTCAGATTCTTGGGACGGTGCAGAAGTTGGATCACCAGTGGTTAAGAGGTTCCTCAGCGACGATGAAGAGAGATGGTTCATGTGGTACCATGGAAGATCAAATAACAGAAACCCTTCTTCTTCAAGCAATGGTGTTCACTGGGAGAGAGGTTCTGATTCAGCAAGATCAAGTAGTGGTGTTGGTTACGTTATGAAGTGTGGTAAAGAATGGTGGGAATTTGATACAAAGGGAATTAGGCCTTCAGAGATACTTATGATGTGTAGTTCCTGGGCTAGTGCTTCTAGTGCTGCTTACTGGCTCTATTACACTGGCTACACTTATGAAAATGTAAACTTCAATGAAAACCCATGTTTGTGTTTCAACGATGATGGAGAAAGTTTGAATCTTTTCAAGTGTCTACCTGGTTTGGCTGTGAGCCATGATGGGAGGCACTGGGCTAGAGTAGAAGGAGAGCATCACAATGGAGCATTGTTTGATGTTGGTGATGAGAGAGATTGGGATTCATTGTTCATTTCATCTCCAAGTGTTGTTTGCCATGGGAACAGTGATTTCAGGATGTACTACCATTCATTTGATGTTGAAAAGGGTCACTTTGCTATTGGTTTAGCAAGGTCAAGGGACGGTAGAAGGTGGGTGAAGTTGGGGAAAATAATGGGTGGATCAGGTAAAGTTGGAAGCTTTGAGGAGTTTGGAGTGATGAATGCTTGTGTTGTAAGAAACCTCAGAGATGGGAACTATGTGATGGCTTATGAAGGTGTTGGTGCTGATGGGAAAAGGAGCATTGGTGTGGCTGTTTCTGATGATGGGTTAATGGATTGGGTTAGGGTTCAAGATGAGGCTGTTCTGAAGCCTTCTGAGATTGGTTGCTGGGATGATAAGTGTGTGGGGGATCTCCATCTTCACCAATACCAAGTGGTGGGTAGGGCTCTTCCCATAGAGAAAGACGAGCATCCTAAGCTCTACTGCATGAAGCTTTGGGCCACCAATGAGATTCGTGCCAAATCCTAA 1419 0.4285 MAPSASLMKACNVNTLSVPIFKPCTNPSSSSRVFFSKSIIELTLHISNSGHNNHHSNNNFPLLSFPSCSSKPDISTDSSDIENKPKGSSEQSSLVSKRQKASKLDKNHASESLTTSPAKSSSSSSSPSRGLVFSLGPSDSWDGAEVGSPVVKRFLSDDEERWFMWYHGRSNNRNPSSSSNGVHWERGSDSARSSSGVGYVMKCGKEWWEFDTKGIRPSEILMMCSSWASASSAAYWLYYTGYTYENVNFNENPCLCFNDDGESLNLFKCLPGLAVSHDGRHWARVEGEHHNGALFDVGDERDWDSLFISSPSVVCHGNSDFRMYYHSFDVEKGHFAIGLARSRDGRRWVKLGKIMGGSGKVGSFEEFGVMNACVVRNLRDGNYVMAYEGVGADGKRSIGVAVSDDGLMDWVRVQDEAVLKPSEIGCWDDKCVGDLHLHQYQVVGRALPIEKDEHPKLYCMKLWATNEIRAKS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03920 472 MobiDBLite consensus disorder prediction 173 193 - -
Adu03g03920 472 Gene3D Glycosyl hydrolase domain; family 43 357 438 IPR023296 -
Adu03g03920 472 Gene3D - 439 472 - -
Adu03g03920 472 PANTHER - 36 435 - -
Adu03g03920 472 Gene3D Glycosyl hydrolase domain; family 43 156 342 IPR023296 -
Adu03g03920 472 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 437 471 IPR023573 GO:0003735|GO:0005840|GO:0006412
Adu03g03920 472 PANTHER - 36 435 - -
Adu03g03920 472 MobiDBLite consensus disorder prediction 108 131 - -
Adu03g03920 472 MobiDBLite consensus disorder prediction 74 131 - -
Adu03g03920 472 SUPERFAMILY Arabinanase/levansucrase/invertase 161 431 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03920 Adu-Chr3 128346958 128349041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03920 432 472 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 73.171 3.04e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03920 - - ahf:112791954 781.941