Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03909 ATGAACTCATGCCCATCTAGCTTTATATACTCTTCCTCATCACAGCAAAATACCAGTAATTCAATGGGGATGGTTTATGAAGACATGGCTTCTCTTTCTCTTTGCTCCAACTACACTCTCACCCCCTCCGCAGCCAGCTGGGGCTTCCCCTATGAGGAGCACCCCACTCACAACAGTGATCTTGCGGAGGGTACTACAAAAGGTTCTGATAGCAGCGAAGATAATGGGGTTATTGGAGAAAACAATAACAACAACAACAACCCTAATAATAAAGAGGGAGAGAGTAGTAGCGGACAGTCAAAGCTTTGTGCAAGAGGTCACTGGAGACCAGCAGAAGATTCAAAACTGAAGGAGCTTGTTGCTCTTTATGGCCCTCAGAACTGGAATCTCATAGCTGAAAAGCTAGAAGGAAGATCAGGGAAGAGTTGTAGACTGAGATGGTTCAACCAGCTTGACCCGAGAATAACGAGGAGAGCTTTCAGTGAAGAAGAGGAAGAGAGGCTGATGCAGGCTCATAGGATTTATGGCAACAAATGGGCCATGATTGCAAGGTTGTTCCCTGGAAGAACCGATAACGCTGTTAAGAATCATTGGCATGTTATTATGGCTAGAAAGTATAGGGAACAATCCAGTGCTTATAGGAGAAGAAGGCTCACACAATCAAACAACTTTTACAGAAGAATTGACCATAACAATAATAATAATAATAATAATAATAATGTATCATCAGAATCATCACCACCACCACACTGTTTTGTGGCTGGCTTCTCATCACTACCGTTTCATGGTGGTGTTCTTGACTTTGGTGCCAATAATAAGCCTTATGCTGCTGTTGCTTCCTCTTCTTCTTCCACCTTCAATTTCTTCTCTGGAGGTAGAGGCAATAATAATAGTAGAGAGATGGTAGGAGGAGAGTATTATTATGGAAGTAATCATCATCATCATTATAATCAGCAGCAAGCACATAATAATAATCATGCTTACTACACTCGTTATCCTAATCATCAGTATATGATGATGATGATGCCATCAGTGCAACAGCATCAAAACAACAACCATAACAAGAATTTTTACAGCTTCTCATCAAATTCAAGCACCACAGTAGCACAGGTGCTAGGCAGTGATCCTTCACTATCATCCATGGCAGAACAACAACACAGAGATCATGAAGAAGCCAGTGACCCCCCAACAACAATCCCAGAGCCTCCGTTATTTATTGACTTCCTTGGAGTAGGAGCCACAACATGA 1248 0.4207 MNSCPSSFIYSSSSQQNTSNSMGMVYEDMASLSLCSNYTLTPSAASWGFPYEEHPTHNSDLAEGTTKGSDSSEDNGVIGENNNNNNNPNNKEGESSSGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRITRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLTQSNNFYRRIDHNNNNNNNNNNVSSESSPPPHCFVAGFSSLPFHGGVLDFGANNKPYAAVASSSSSTFNFFSGGRGNNNSREMVGGEYYYGSNHHHHYNQQQAHNNNHAYYTRYPNHQYMMMMMPSVQQHQNNNHNKNFYSFSSNSSTTVAQVLGSDPSLSSMAEQQHRDHEEASDPPTTIPEPPLFIDFLGVGATT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03909 415 MobiDBLite consensus disorder prediction 61 102 - -
Adu03g03909 415 MobiDBLite consensus disorder prediction 376 403 - -
Adu03g03909 415 SUPERFAMILY Homeodomain-like 105 198 IPR009057 -
Adu03g03909 415 ProSiteProfiles Myb-like domain profile. 152 202 IPR001005 -
Adu03g03909 415 Gene3D - 159 224 - -
Adu03g03909 415 ProSiteProfiles Myb-like domain profile. 105 151 IPR001005 -
Adu03g03909 415 CDD SANT 108 149 IPR001005 -
Adu03g03909 415 Pfam Myb-like DNA-binding domain 105 151 IPR001005 -
Adu03g03909 415 Pfam Myb-like DNA-binding domain 157 200 IPR001005 -
Adu03g03909 415 PANTHER MYB TRANSCRIPTION FACTOR 274 414 - -
Adu03g03909 415 PANTHER MYB TRANSCRIPTION FACTOR 22 281 - -
Adu03g03909 415 SMART sant 104 153 IPR001005 -
Adu03g03909 415 SMART sant 156 204 IPR001005 -
Adu03g03909 415 MobiDBLite consensus disorder prediction 55 106 - -
Adu03g03909 415 MobiDBLite consensus disorder prediction 222 247 - -
Adu03g03909 415 CDD SANT 159 199 IPR001005 -
Adu03g03909 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 206 IPR017930 -
Adu03g03909 415 Gene3D - 105 156 - -
Adu03g03909 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 151 IPR017930 -
Adu03g03909 415 PANTHER MYB PROTEIN-RELATED 22 281 - -
Adu03g03909 415 PANTHER MYB PROTEIN-RELATED 274 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03909 Adu-Chr3 128176073 128177645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03909 104 217 MYB Transcription Factor Family AT1G69560 90.351 3.13e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g03909 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03909 K09422 - gmx:100804537 351.288