Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03907 ATGGAAAATGTGCAAAGTAGCATGCACTTGATTCTCTCAACTGATGCAAAGCCAAGGCTCAAATGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAATTAATCAGCTTGGAGGTTCAGAAAAAGCAACACCAAAGAGTCTTATGAGGGTGATGGGGATTCCTGGACTCACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACCCCAACTTGAAATCTGTTCTGGCAACAACAAACATGAAGATTGCAGAGAGATGAAGAACAGTGAAGGTCCTTGTAGCAGCAGGGAAGAAAGTATTGGGACACAGAATGAGATGACTGAAAGCATGCAAATTGCTGAGGCTCTCCAAATGCAAATGGAAGTGCAGAAGAAACTTTATGAGCAAATTGAGGTGCAGAGACATTTGCAGCTTAAGATTGAAGCACAAGGGAAGTACTTGCAATCAGTACTACACAAGGCACAAGAAACACTTGCAGGAATGATCAACAATGGCAGCCCGGGATCTCCTCCGATTTCGGAACTGACAGAAACAAGAGGAGGGTTCAGTTGGAGCTGTGGGCAGAGGAAACAGAACAGAGGAACCATGTGTTCACTTGAAATTGAAAGTTCTTTGACATCTTCTGAAAGTTCAATGGATCAAAGGCCTAATAGTACTAACACTACTAATACTGCTTCACTTGAATTGTTGCCACTCTTTAAAGAATCTAAGGAACAGGAAGATGAATCTATTATTGGGAGAAAGAGGAGTTCAAGCTGCTGTGTTGATCAGCCATCAAAGATGAGCAGATCTGAATTAGTGTCAGATATCATTGACTTGAATTCAGAACAAATAGATTTAAATTGCAGTTCAAGCTTCTGGGAACAATGA 891 0.413 MENVQSSMHLILSTDAKPRLKWTPELHQRFIEAINQLGGSEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQPQLEICSGNNKHEDCREMKNSEGPCSSREESIGTQNEMTESMQIAEALQMQMEVQKKLYEQIEVQRHLQLKIEAQGKYLQSVLHKAQETLAGMINNGSPGSPPISELTETRGGFSWSCGQRKQNRGTMCSLEIESSLTSSESSMDQRPNSTNTTNTASLELLPLFKESKEQEDESIIGRKRSSSCCVDQPSKMSRSELVSDIIDLNSEQIDLNCSSSFWEQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03907 296 Pfam Myb-like DNA-binding domain 19 70 IPR001005 -
Adu03g03907 296 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 166 288 - -
Adu03g03907 296 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 167 - -
Adu03g03907 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 166 288 IPR044848 GO:0003700
Adu03g03907 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 167 IPR044848 GO:0003700
Adu03g03907 296 Gene3D - 16 74 - -
Adu03g03907 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Adu03g03907 296 Coils Coil 120 140 - -
Adu03g03907 296 MobiDBLite consensus disorder prediction 245 267 - -
Adu03g03907 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Adu03g03907 296 MobiDBLite consensus disorder prediction 209 232 - -
Adu03g03907 296 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Adu03g03907 296 Pfam MYB-CC type transfactor, LHEQLE motif 117 164 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03907 Adu-Chr3 128102915 128104474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03907 1 276 G2-like Transcription Factor Family AT1G69580 47.910 1.02e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu03g03907 Myb_DNA-binding 4.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03907 - - gmx:100805252 322.398