Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03897 ATGGCTTTGAAGAACATGCATTCCTCTTTTCTTACCCTCTTTGTTGTAATGCTTTCTTTCTTTCCCTCTTTATCCATGGCCAAACATTATTATTACAACAATACTGTTCCACCAGCAACATTTTGTGACACCACAGAAGACCCTGCTTATTGCAAAACCCTGCTTGCAAACCAATACGGCAACGGTTATGACTACGGTCGAATTTGCGTCCAAAAATCAGTGTCACAATCACACAGCTTCTTGAATTTAATGGACTCATATCTCCAGGATGGATCATCGTACGATCAAAACACGATTCGAGCCCTGGAAGATTGTAGATTCCTCGCTGAACTAAACTTGGATTTCTTGTACAATACACAAGAGACGGTTAATAAATCCAGCAATGTTCTTCAATCTTCACATGCTGAAGACATTGTGACACAGCTCAGTGCTACTTTGACGAACCAACAAACATGTTTGGATGGTCTTCAAACCACAGCTTCCGATGAAAGAGTGAAGAGTTATCTTTCTTCAATGCTCTCTAATGATACCAAGCTCCATAGCATGTCCTTGTGTTTGTTCAGGAGGGGTTGGGCTCCTGAGAAGAAAATCAAACATTCATGGAAACAAAATGGTCGTTTACCGTATAAGATGCCGAAACGAGTACGTGACATGTATGATTCGGGTAGAGGCCGCCATGGAAACCACGGCCGCCACCACCACCTGAGGAAACTGCTTCAGACGGAAAGCGTAAATGTAAGGGATATGGTGGTTGTTAGCAAGGACGGAAGCGGAAACTTCACCACCATCAACGCAGCCATATCTGCGGCGCCAAATAACACGGCTTCCAGTGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCCATTGCGAAGAACAAGAAACACTTGATGCTAGTTGGAGATGGAATCAACCAGACAATAATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAACGTTCAACTCAGCAACTTTTGCTGTGGTGGGACAAGGTTTTGTAGCAGTGAACATAACATTTCGAAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCCCTGAGAAGCGGAGCCGACTTATCAGCTTTCTACATGTGCAGTTTTGAGGGCTATCAAGACACGCTCTACGCCCATTCCATGCGTCAATTCTACAGCGATTGCTACATTTATGGTACCGTTGATTTTATTTTCGGTAACGCTGCGGTAGTCTTCCAAAATTGCAACATTTTTTCCCGCCTCCCTATGACCGGCCAGTTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGAGCCGCTAACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCTAGGACAGTTTTCATGGAATCTTTTATGGATGGTTTTGTTGATCCTGCTGGGTGGCATGATTGGAGTGGAAGTTTTGCGCTGAATACTTTGTATTACGCGGAGCATAAGAATGCGGGAAGTGGTTCAAGCACTGCAAGTCGAGTTTCGTGGCCTGGTTATCATGTTATTGGGGCAATGGATGCGGCTAATTTCACTGTGTCTAATTTCTTGCAGGGGGATAGCTGGTTGCCTCAAACGGGTGTTCCATTCTTGAATGGGTTAATATAA 1692 0.4498 MALKNMHSSFLTLFVVMLSFFPSLSMAKHYYYNNTVPPATFCDTTEDPAYCKTLLANQYGNGYDYGRICVQKSVSQSHSFLNLMDSYLQDGSSYDQNTIRALEDCRFLAELNLDFLYNTQETVNKSSNVLQSSHAEDIVTQLSATLTNQQTCLDGLQTTASDERVKSYLSSMLSNDTKLHSMSLCLFRRGWAPEKKIKHSWKQNGRLPYKMPKRVRDMYDSGRGRHGNHGRHHHLRKLLQTESVNVRDMVVVSKDGSGNFTTINAAISAAPNNTASSDGYFLVFIKKGVYEEYVSIAKNKKHLMLVGDGINQTIITGDRNVVDGSTTFNSATFAVVGQGFVAVNITFRNTAGPSKHQAVALRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCYIYGTVDFIFGNAAVVFQNCNIFSRLPMTGQFNSITAQGRTDPNQNTGISIHNATIRAANDLAPRVGVVKTYLGRPWKQYSRTVFMESFMDGFVDPAGWHDWSGSFALNTLYYAEHKNAGSGSSTASRVSWPGYHVIGAMDAANFTVSNFLQGDSWLPQTGVPFLNGLI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03897 563 CDD PMEI-like_3 40 192 - -
Adu03g03897 563 SMART PMEI_2 33 186 IPR006501 GO:0004857
Adu03g03897 563 Gene3D - 243 562 IPR012334 -
Adu03g03897 563 PANTHER PECTINESTERASE 30 560 - -
Adu03g03897 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 188 IPR035513 -
Adu03g03897 563 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 30 560 - -
Adu03g03897 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Adu03g03897 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Adu03g03897 563 Pfam Plant invertase/pectin methylesterase inhibitor 40 184 IPR006501 GO:0004857
Adu03g03897 563 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Adu03g03897 563 SUPERFAMILY Pectin lyase-like 248 560 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03897 Adu-Chr3 127945975 127948456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03897 13 563 Carbohydrate Esterase AT1G02810 53.460 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03897 K01051 - gmx:100813051 761.911