Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03895 ATGGAAGGTGAGAAGCTTGACGAGATCATGTTACCAGGTTTCAGGTTCCACCCAACTGATGAGGAGCTTGTCGGGTTCTACCTTAAGAGAAAGATTCAGCAAATGCCTCTGTCCATTGAGCTCATCAAGCAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAAGTGGCAGGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGGAACAGTGCAAGGCCAAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCCACAGGGACTGACAGGCCTATATACTCCTCAGAGGGTTCAAAGTGCATTGGACTCAAGAAATCTTTGGTCTTCTACAAAGGCAGAGCTGCCAAAGGTGTTAAAACTGATTGGATGATGCATGAGTTTAGGCTTCCTTCTCTTGTTGACTCTTCTTCATCCGACAAGACCACTATTCCTGCTAATGACTCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCTACAGCTCAAAGAGCACTCTCTCACTCTTGGGTTTCTACCTTACCTGAAACAACACCAACCACCACTACCAATGATACAGATCACATATTCAACATGCCAACGATGATGGCAAAGAAAACTAGCTTCATGACCCAGTTTTGCACTAACTACACTAGTGACACACAAATCCAAGATGTTGCATCATCTTATAAACCACCCTTTATTAATATTAATCCATTGCTTTACAAGCAGTTTGATCATCATCATCATCAGTTACCACCTATTATTTCAAATGGAGATCTTATAAGCAACGACTGCTTAATACCCTCTTCTACTACTCCACTTGAAACATCCTCTAATAGTGCAAAACCTACTATGGATTTTTCTTCATTGTTGCTGAACATGTCATCTTCTGTTCTTGGAGATTTTGCTGGAAAGACATCGTCGTCGTCCTCATCCCAAGAGGGTACAGCAGCAGCAGCAACAGCAACAACAATCACGAGTAGCTTCGGTGGTGGAATGCAGGAGCACTACCCAACAATACCATTACTGCGTCAGATGCATCAAGGGAACAACAACAACAACAACAACATTGGCATCAACAACAACAACGTGTCTGCTGGCGGTGAAGAACAAGAGTTGGAGAAAGTTGGATCCATTGTTGGGTTCCCATTCATGAACATTGGGGATGCATGGAAGTCAAATATGCTTTGGGATACTTCTTGTCCCTTATACAATGAAGGAGAAGTTGGCACCATTGAAGTGATTATTGAAGATAGTCAGGGCACAAGGTTGCAAGTCTCGATCCCTAAATCCCTGGTGAGCAAGTGGCGAGGTGTCTTGGTTCAGTTTCAAATGTACATTATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTTGAGAATCCCAGTTTTTCGCTAAATGCTTTTCGATTTAGAACCATCCGTGAGTTACTAAATGCTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTGTTATCTTGGAGGACCTAGAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGGAAGGTCCAGCTTGGATTGCTGCAAGTATTGTTGCGATTAATGTTACGAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAACTCCTATTGGAAACAGATATGAATGTGGGAAGTGTGGCCATACACATGGATCTGCAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGATGGAACCGGTAGCATCCGATTGCTACTATGGGACAAGGAAACAAGTATGCTATGTGGGAAGAGAGCTGAACAGATTATGGAGGACGATGTTATAGTGGGAGATGAATATCCCAAGACACTTGATAACATGATGGAAAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAATTTGATCATGTGTACACGGTTATGAAAATCTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTCTACTAATCTTCCGAGTAATGTCAGTGAAGATGGCTGCAACAACTATTTGGAAATTTCAGAAAATGTGGCTAATCTTAAAACTGATTGTGATACTGAGTCTTCTATGGATGTTGTGGAGGAGTGCATCTCATCCCTCAAGTACAAAACACCATCCAAAAATATTACCAATGGATTGAAGAATTTTCCTCTAAGTCTGAATGAAGATGAGGAAGAAGGCCAGCTATCAACCAACAGGTTCAGTAGGAAGATGGGAAAGAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 2724 0.413 MEGEKLDEIMLPGFRFHPTDEELVGFYLKRKIQQMPLSIELIKQLDIYKYDPWDLPKVAGTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLVDSSSSDKTTIPANDSWAICRIFKKTNATAQRALSHSWVSTLPETTPTTTTNDTDHIFNMPTMMAKKTSFMTQFCTNYTSDTQIQDVASSYKPPFININPLLYKQFDHHHHQLPPIISNGDLISNDCLIPSSTTPLETSSNSAKPTMDFSSLLLNMSSSVLGDFAGKTSSSSSSQEGTAAAATATTITSSFGGGMQEHYPTIPLLRQMHQGNNNNNNNIGINNNNVSAGGEEQELEKVGSIVGFPFMNIGDAWKSNMLWDTSCPLYNEGEVGTIEVIIEDSQGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFIVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFSLNAFRFRTIRELLNAEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLAVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKCGHTHGSAALRFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDKNLPKELSTNLPSNVSEDGCNNYLEISENVANLKTDCDTESSMDVVEECISSLKYKTPSKNITNGLKNFPLSLNEDEEEGQLSTNRFSRKMGKRQKCVNLDADI 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03895 907 SUPERFAMILY Nucleic acid-binding proteins 492 616 IPR012340 -
Adu03g03895 907 ProSiteProfiles NAC domain profile. 10 165 IPR003441 GO:0003677|GO:0006355
Adu03g03895 907 SUPERFAMILY Nucleic acid-binding proteins 649 797 IPR012340 -
Adu03g03895 907 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Adu03g03895 907 Gene3D NAC domain 19 170 IPR036093 GO:0003677|GO:0006355
Adu03g03895 907 Gene3D - 634 804 IPR012340 -
Adu03g03895 907 Gene3D - 398 483 IPR012340 -
Adu03g03895 907 PANTHER PROTEIN FEZ ISOFORM X1 2 404 - -
Adu03g03895 907 CDD RPA1_DBD_B_like 512 616 - -
Adu03g03895 907 Pfam Replication factor-A C terminal domain 672 795 IPR013955 -
Adu03g03895 907 Gene3D - 486 622 IPR012340 -
Adu03g03895 907 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 404 - -
Adu03g03895 907 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Adu03g03895 907 CDD RPA1_DBD_C 649 795 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03895 Adu-Chr3 127909587 127916679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03895 4 190 NAC Transcription Factor Family AT1G26870 79.581 2.61e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu03g03895 Rep_fac-A_C 1e-14 CL0021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03895 - - ahf:112803472 784.637