Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03882 ATGAGTGAGAAAACGATCATGGAGCCTGACCACCATCAAAATGGGATCCGCACCAGACCTAATTTTCCACTCCAACTCTTAGACAATAAGAAAGATGACGGTCGCGGCCGACGGATCCGTATGCCGGCTGCAGCCGCTGCCAGGGTGTTCCAGCTGACGCGGGAGCTTGGCCACAAGTCTGACGGGGAGACCATCGAGTGGCTCCTCCAACAGGCTGAGCCCTCCGTCATCGCGGCCACCGGAACCGGTACTATCCCTGCAAACTTCACTTCCCTCAACATCACGCTTAGAAGCTCAGGATCCACCATCTCTTCCCCCTCTCACTACTTCAGAGGCGCCACCGCCACCGCTACACCGTACCTTAGCCACGCAGCCAGCTTCTCCGCCGCTAGGAGCCGCAGCGAATGGGTGAGGAACGTGGCGGTGGAAGATTATTCTAGAAGAGTCATGTTCTCCGGCAGTGACAATAGTAATAATAATAACAACAACAACTCTGCTGCTGCTGCTACTACTGTCTTGAATTTCAACAACGCTGTTAATGATATTATGCAAAGCAAGCAAGAGGCTCGGGAAGAGCCCTGTAGCGGTGACGGTGGCGGCGGAGGAGATGCTTTGGGGAGGAAGAGAAGGCAAGAGGAGGTGTTCTCACAGCACCAGGGTACTCAGATGATGGGTAGCTACTTGTTACAGTCGAGTTCAGGGTCAATTCCGGCGACTCATGCTTCTATTCCGGCGACTTTTTGGATGATGGGCGGCGGTGGAGTTGGTGGTGGCAGTGGTAATAATGGCGGTGACCCAATTTGGGCAATTCCAACCGTTGGTAACAATAGTAGCATGTATAAAGGGGCTATGTCTGGTGGCAGCGGCGGCAACGGTGCCGGCGGCATTCATTTCATGAATTTTGCTTCTCCAATGGCTCTATTGCAAGCTCAACAACTAGGAGGAGGAGGAGGCGGCGGCGGCAGTGCAGTGCTGAGTGAAAGTAACCTGGGAATGCTTGCAGCTCTTAATGCATACAGGCCTATTATGGCTAACGGCAGCGGCGGCCAACACTCACCCCATGGAGATGGAGGAGATCAAGAAAGTCAACCCTGA 1095 0.5388 MSEKTIMEPDHHQNGIRTRPNFPLQLLDNKKDDGRGRRIRMPAAAAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNITLRSSGSTISSPSHYFRGATATATPYLSHAASFSAARSRSEWVRNVAVEDYSRRVMFSGSDNSNNNNNNNSAAAATTVLNFNNAVNDIMQSKQEAREEPCSGDGGGGGDALGRKRRQEEVFSQHQGTQMMGSYLLQSSSGSIPATHASIPATFWMMGGGGVGGGSGNNGGDPIWAIPTVGNNSSMYKGAMSGGSGGNGAGGIHFMNFASPMALLQAQQLGGGGGGGGSAVLSESNLGMLAALNAYRPIMANGSGGQHSPHGDGGDQESQP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03882 364 MobiDBLite consensus disorder prediction 344 364 - -
Adu03g03882 364 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g03882 364 MobiDBLite consensus disorder prediction 1 15 - -
Adu03g03882 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 361 IPR005333 GO:0003700
Adu03g03882 364 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 30 361 - -
Adu03g03882 364 Pfam TCP family transcription factor 34 191 IPR017887 -
Adu03g03882 364 ProSiteProfiles TCP domain profile. 8 79 IPR017887 -
Adu03g03882 364 MobiDBLite consensus disorder prediction 186 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03882 Adu-Chr3 127723048 127724813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03882 31 312 TCP Transcription Factor Family AT3G47620 43.038 3.45e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu03g03882 TCP 9.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03882 - - aip:107633962 518.85