Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03872 ATGGTTGTTGCTGTCAAGAAACTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACCGAAGTTAATTACCTGGGACAACTTCACCATCATAACCTGGTTAAGCTAATTGGTTACTGCGTGGAGGGGGAAGATCGGCTGTTGGTGTATGAGTTCATGCCCAAAGGGAGCTTAGAGAATCATCTGTTTAGAAGAGGACCACAGCCACTTTCTTGGTCACTTAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGTCTAACTTTTCTTCACAATGCCAAATCACAAGTCATATACCGCGATTTTAAAGCTTCGAATATCCTACTAGATGCTGAGTTCAATGCAAAACTCTCTGATTTTGGCTTAGCCAAGGCTGGTCCTACTGGAGATAGAACTCATGTCTCTACTGAAGTTATGGGTACTCGTGGATATGCAGCACCTGAATATGTAGCAACAGGGCGGTTGACAGCCAAAAGTGATGTATATAGCTTTGGGGTTGTATTGCTTGAGCTTTTGTCTGGAAGACGTGCTGTTGATAGAACAAAAGCCGGTGTCGAGCAGGACCTTGTAGACTGGGCGAAACCGTATCTAGGTGACAAAAGAAGACTATTTAGGATTATGGACACCAAGCTCGAGGGTCAATACCCACAGAAAGGAGCCTACATGGCTGCTACTCTTGCTTTAAAATGCCTTGATCGGGAAGCCAAGGCAAGGCCGCCAATGACAGAGGTTTTAGAAACCCTCGAGCAGATAGAAGTCCCCAAAACTGCAGCGCGAAACTCTCAATCAGGGCAGAAGAGAGTACATGTTCCTCCAAGCCCAAGGAAGTCTCCTGGACAGAATCTGTCCCCCATGAATGTTACTCGAACTTCATACCCATTGCCGCCTTGCCGAGAATCCCCTCATGTACATTAA 915 0.4623 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHHNLVKLIGYCVEGEDRLLVYEFMPKGSLENHLFRRGPQPLSWSLRMKVAIGAARGLTFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTEVMGTRGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQDLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYMAATLALKCLDREAKARPPMTEVLETLEQIEVPKTAARNSQSGQKRVHVPPSPRKSPGQNLSPMNVTRTSYPLPPCRESPHVH 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03872 304 PIRSF ILK 1 263 - -
Adu03g03872 304 MobiDBLite consensus disorder prediction 254 268 - -
Adu03g03872 304 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Adu03g03872 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Adu03g03872 304 PANTHER OS01G0588500 PROTEIN-RELATED 1 302 - -
Adu03g03872 304 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 1 302 - -
Adu03g03872 304 Gene3D Transferase(Phosphotransferase) domain 1 55 271 - -
Adu03g03872 304 SUPERFAMILY Protein kinase-like (PK-like) 2 248 IPR011009 -
Adu03g03872 304 Pfam Protein tyrosine and serine/threonine kinase 2 248 IPR001245 GO:0004672|GO:0006468
Adu03g03872 304 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03872 304 CDD STKc_IRAK 2 251 - -
Adu03g03872 304 MobiDBLite consensus disorder prediction 253 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03872 Adu-Chr3 127471979 127474811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03872 1 248 Glycoside Hydrolase AT3G07070 56.574 2.75e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu03g03872 PK_Tyr_Ser-Thr 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03872 - - gmx:100809778 519.235