Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03863 ATGTTGCAGTTGAAGCTACACTCAATCCCTTCATCACTTTCTTCTTCTTCCAATTCTCTCTGCCTTCAGAACCATTCCTTTCTCTCTCCAAAGTTCCTTCCTTTTTCTTCTGTCACTCCAAAGCCCTTCTCCATCACATGCCGCCACTCCGACCTCTTCGACCAGAAAACCTTCTCCTCCTCCGCACCTTCTTCTTCTTCTTCTTCAGGTGGAGCTTTGCCACCTAGGGTTTATGTTGGTCACTCCATTTACAAAGGGAAGGCTGCACTTTCCATCACTCCTAGGCCTCCGGAATTTGCCCCGCTCGATTCAGGGGCATTCAAAATATCTAGGGAAGGTTATGTTCTGCTTCAGTTTGCACCCGCAATTGCTTCGCGCCAGTATGATTGGACTAGAAAGCAGGTGTTCTCTTTATCAGTGGGCGAAATGGGAACTGTGATCAGCCTTGGCGCAAGGGAGTCTTGTGAATTCTTCCATGATCCTATGAAGGGCAAAAGtgatgaaggtaaagtcagaaaagttttGAAGGTGGATCCTCTTCCAGATGGTTCTGGTCACATGTTTAACCTCAGTGTTCAAAACAGGATTGTGAATGTCGATGAAAACATCTACATCCCTGTCTCAAGAGCAGAGTTAACAGTTTTGAGCTCAATTTTCAATTTTATTATGCCATACCTTCTCGGTTGGCACACCTTTGCGAACTCGATAAAGCCAGAGGATTCGAGAGGAGCGAATAATGCAAACCCTACATATGGAGGAGACTATGAATGGAATAGACTGTGA 783 0.4432 MLQLKLHSIPSSLSSSSNSLCLQNHSFLSPKFLPFSSVTPKPFSITCRHSDLFDQKTFSSSAPSSSSSSGGALPPRVYVGHSIYKGKAALSITPRPPEFAPLDSGAFKISREGYVLLQFAPAIASRQYDWTRKQVFSLSVGEMGTVISLGARESCEFFHDPMKGKSDEGKVRKVLKVDPLPDGSGHMFNLSVQNRIVNVDENIYIPVSRAELTVLSSIFNFIMPYLLGWHTFANSIKPEDSRGANNANPTYGGDYEWNRL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03863 260 Gene3D Transcriptional Coactivator Pc4; Chain A 70 247 IPR009044 GO:0003677|GO:0006355
Adu03g03863 260 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 23 259 IPR013742 GO:0003697|GO:0006355|GO:0006952
Adu03g03863 260 SUPERFAMILY ssDNA-binding transcriptional regulator domain 75 259 IPR009044 GO:0003677|GO:0006355
Adu03g03863 260 Pfam Whirly transcription factor 83 217 IPR013742 GO:0003697|GO:0006355|GO:0006952
Adu03g03863 260 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 23 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03863 Adu-Chr3 127401549 127403688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03863 4 259 Whirly Transcription Factor Family AT1G14410 62.452 3.38e-118 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Adu03g03863 Whirly 2.7e-59 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03863 - - gmx:100789252 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03863 03 127401549 127403688 Adu03g03863 03 127401549 127403688 ECH