Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g03859 | ATGGAGCTTGCATCTGTGAAGAGTGAATTCAACCCAAGATGTAATAGGTTACACGTTATGGTGGATGGCAGCGAGGCTAATGCTTCAAGGGGCATCAAAAGGCGGCGAAGAGATTCGTCTTCGCCTCTGCCTCCAACGGTGTTAGGGGGCAATGAACAACAAGGTGAACAGCCGGAAGCCCAACAGACACCACAGAGTGGCCAATCGACCCCCAGCACCGTGAAGAGAAGTTCAAGACACAGATGGACTGGAAGGTATGAAGCACATCTATGGGATAAAGGGACATGGAATCCAACTCAGAAAAAGAAAGGAAAGCAAGGAGCTTATAATGATGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTTAAGTATTGGGGAACATCAACGTTCACCAATTTTCCAGTATCAGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATACCTTGCTTCATTGAGAAGAAGAAGCAGTGGATTTTCTAGAGGTGTATCAAAGTATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATTGGAAGAGTGTTCGGCAACAAGTACCTTTACCTTGGAACTTACAGTACACAAGAAGAGGCAGCTCGCGCATATGATATTGCTGCAATTGAATACAGAGGCATAAATGCTGTGACAAACTTTGACTTGAGCACTTACATCAGATGGCTAAGACCAGGAGGAGTACACTCTAGCACCTCTCAAGATCAAAAGCCGAGCACAGACCCTCAGATATTTACAACCTCTAACCCCATCCTAGCCACAGGAGCCACCGAGCTATCAAACTTCAACTTCCATCCAGTCCCTGCAAGCGAATTGGACATCACCAAGAAGAAAGAGTTTTCCAAGTTTGCGGCACCTTTAAGTCCATGCTATAAGTCACCTTCATCTTCCCCAACAGCATTAGGACTTCTACTAAAATCCTCAGTGTTTAGAGAACTGATGCAGAGAAACCTGAATTCTGCAGATGAAGAAGCTGAAGAAGTTGAATTGAAATATCCAGAAGAGGGCAGTGATGGGATTGGAGGGATTCTTAATAACAATGACACTAACAGTATATCTTACTTTGGTTCTTCTTCCAATATCAACAGATTACCTAACTTAGTGTCTCCAGAAAGCAGCAAAATGCCAATGTATCACAGAACTGTTATGCCATCGCTGTGGAATGGTGCTTTCAACATTTCTGACTGA | 1233 | 0.4363 | MELASVKSEFNPRCNRLHVMVDGSEANASRGIKRRRRDSSSPLPPTVLGGNEQQGEQPEAQQTPQSGQSTPSTVKRSSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYEKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGGVHSSTSQDQKPSTDPQIFTTSNPILATGATELSNFNFHPVPASELDITKKKEFSKFAAPLSPCYKSPSSSPTALGLLLKSSVFRELMQRNLNSADEEAEEVELKYPEEGSDGIGGILNNNDTNSISYFGSSSNINRLPNLVSPESSKMPMYHRTVMPSLWNGAFNISD | 410 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g03859 | 410 | SUPERFAMILY | DNA-binding domain | 78 | 138 | IPR016177 | GO:0003677 | |
Adu03g03859 | 410 | SMART | rav1_2 | 172 | 236 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | SMART | rav1_2 | 79 | 142 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | CDD | AP2 | 171 | 232 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | MobiDBLite | consensus disorder prediction | 44 | 77 | - | - | |
Adu03g03859 | 410 | ProSiteProfiles | AP2/ERF domain profile. | 172 | 230 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
Adu03g03859 | 410 | Gene3D | AP2/ERF domain | 74 | 138 | IPR036955 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | Gene3D | AP2/ERF domain | 171 | 232 | IPR036955 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | SUPERFAMILY | DNA-binding domain | 171 | 232 | IPR016177 | GO:0003677 | |
Adu03g03859 | 410 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 401 | - | - | |
Adu03g03859 | 410 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | Coils | Coil | 326 | 346 | - | - | |
Adu03g03859 | 410 | Pfam | AP2 domain | 171 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Adu03g03859 | 410 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 401 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g03859 | Adu-Chr3 | 127389996 | 127392259 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g03859 | 59 | 234 | AP2-EREBP Transcription Factor Family | AT5G57390 | 64.674 | 2.81e-76 | 242 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Adu03g03859 | AP2 | 8.6e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g03859 | - | - | adu:107481246 | 800.431 |