Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03823 ATGGTGATCTGTTTGCAATTCGGGTCTGGAATTGTCGCTCGTGGTTGTTACTTGGATGCTTACATGAGATCTCAGATCAAAAGACCAATGGTATCTTCTAGAGGAGCAGCCTCGCGACAACCCCACGTTGCAATTGATAATACTGTTCAGAAACCGACTCAAGATGATGCCGTAAAATACCTAAAGACCGTGAAGGATGCTTTTCATGATAAGCCGGAAAAGTATGCTAACTTTTTACAAGTAATGAAAGATTTCAGGGCTCAAAGAATTGATACAGCGGGTGTCATAGCAAGAGTGAAGGAGCTATTTAAAGGGCATAGAAATCTAATTTTAGGGTTTAATACCTTCTTGCCTAAGGGATATGAAATTACACTTCCGTTGGAGGATGAACAACCTCAGCAGAAGAAGCCTGTTGAATTTGTTGAAGCTATAAATTTTGTGGGCAAGATCAAGAGTCGGTTTCAAGGCGATGACCGTGTGTATAAGTCGTTTCTTGATATATTGAATATGTACAGAAAGGAAACCAAGACTATCTCTGAGGTTTACTTAGAGGTTGCTGCACTTTTCCGTGACCATGAAGATCTTCTTGAGGAGTTTACTCATTTTCTTCCTGATAATTCAGTATCAGCTTCAACTCATTATACTTCTGCCCGAAATTCTATACTTCGTGATAAGAGCTCTGCAATGCCAACTATTAGACCAATGCATGTTGACAAGAAAGAAAGGACCACGGCTTCTCATGGTGAACGTGATCTCAGCGTTGAGCATCCTGATCAAGAACTTGATAAAAGTTTGGTGAGGGCTGATAAGGACCAGAAAAGGCGTGCTGAAAAGGAAAAGGACCGTCGAGAAGAGAGAGATAGGAGAGAAAGGGAAAGGGATGATAGAGATTATGATGTTGATTGTAATAGAGACAGTTTATCCCACAAGCGAAAATCTGGTCGTAGGACTGATGACTCTGGTGCTGAACCATTCCATGAAGAAGATGAAAATTTTGACCTGCGCCCTATGTCATCTACTTGTGAAGATAAAAGCTCTTTGAAAAGTATGTGTAGTCAAGTCGTTGCTTTCCTTGAAAAAGTCAAGGAGAAATTACGAACTCCTGAGGTTTATCAAGAATTTTTGAAGTGTCTACATATATACAGCAGGGAAATAATTACCCGACAAGAATTGCAGTCATTGGTGGGTGATTTGCTGGGGAAATTTCCAGATCTTATGGAGGGATTTAATGAATTTTTGGCACAATGCGAGAAGAATGAGTCCTTGCGGAATGAAGGACATGGATTGAAAGCATTGAAGGTAGAGGAGAGGGATAGAGATCGAGACCGTGATAAGGTTGAAGGGGTGAAAGAAAGGGATAGAGAGTGCCGAGAAAGGGACAAATCCACTGCAGCAGCTGCAAATAAAGATGTTTTCGTTCCTAAGATGTCTCCATATGCCACCAAGGATAAGTATTTGGCAAAACCTATAAATGAGCTAGACCTTTCTAATTGTGAACAATGCACTCCCAGTTACCGTCTTCTTCCAAAAAATTACCCAATACAAATACCTAGCCAGAGAACAGAACTTGGTGCAGAAGTATTGAATGACCACTGGGTGTCTGTCACTTCAGGAAGTGAAGATTATTCCTTTAAACACATGCGAAAAAATCAGTTTGAAGATATTCTGTTTAGATGTGAAGATGACAGGTATGAACTTGATATGCTGATCGAGTCTGTAAATGTAGCAATCAAGCGAGTAGAAGAGCTCTTGGAAAAGATTAATACTAATATTATAAAGGGAGACAGTCCAATTCGAATTGAGGAACACTTCACAGCTTTAAATCTTAGATTGATTGAACGATTATATGGTGACCATGGGCTTGATGCAATGGATTGGCTAAGAAAGGATGCACCTCGCTTTTTGCCTGTCATATTAAACCGCTTGAGGCAGAAACATGTAGAATGTGTAAGGATGAGTGTTGCTTGTAAACCAGAGTGGGCTAAAGTACATGCTGCGAATCATCATAAATCACTTGATCACCGTAGCTTCTACTTTAAGCAGCAGGATAAGAAAAGCTTGAGTAATAAAGCCTTACTGACAGAAATCAAAGAAATTAGTGAGAAGAAATGGAAAGATGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGGCCTCTTCTTCCAAACTTGGAATTTGAGTATCCTGATCCAGAGATCCATGAAGATTTGTATCAGCTAATAAAATACTCCTGTGGAGAACTTTGTACAACTGAACAGATGGATGAAGTTTTAAAGATTTGGACTACTTTTTTAGAACCCATGCTTGGTGTTCCTTCTCGACCCCAGAGTTGTGAAGATACAGATGATATTGTTAAGGCTAAGAGCAATTCTTCTAGAAGTGGCACTTCAAATGATTCTAATGGTAATGATAGTCATGGTTTTGGTGCGACTCCTAATAATTTAAACACTAACGAAAACAGGGATGAGAGTATTCCGTTAGCACAGTCAAATTCTTTTAAAGAATGGTTAGCAAATGGGGATAGTGGAGTTAAAGAGAGTAGTCATCTTGATTCAGACCGCACTTCATACAAGATTGAAACTTTGGGCAGTAATACACAGCAGGGTAAAATACATATGATTGCATCCATCCCTGATGAAGTATCAAGAATCAATAAACAAGACCATCCGATTGAAAAGTTGGCGAGTGCTAATATCTCAGTGGCCTCTGGAATGGAGCAAAATGGAAGAACTAACATAGATAACACATCAGGACTTACTTCACCTCCATCTGGTCCTGGTAATGTTTCTGGCGAGGGAGGGCTTGGCTTACCTCCATCAAAGCCCGCTGATTCTACAAAACCTGTTACATCTTCAAATGGGGTTATTACTGAAGGCACCAAAGTTCACCGACCCAAAGATGAATCAGTTGGACACTTCAAAAGTGATAGAGAAGAGGGAGAATTATCTCCCAATGGAGACTTTGAAGAGGACAACTTTGCAGTTTATGGAGAAGCTGGTTTGGAGGGAGTGATTGAAGGGAAGGATAGTAGTACAAGCCGACAATACCAAAGTAGACATGGAGAAGAAGTTTGTGGTGAAGCCGGAGGAAGAAATGATCTTGATGATGAAGGCGAGGAAAGTCCTCATAGGTCGTCAGAGGACAGTGACCATGCTTTGGAAAATGGTGATGTTTCTGGTAGTGAGTCTGCTGATGGTGACGACTTTACACGAGAAGAAAAAGAGGGTAGGGATCAAGAACACAATAACAAGGCTGAGAGTGAAGGTGAAGCTGAAGAAATGGCTGATGGCAATGATGTTGAGGGAGATAGTTCCTTGGTACCAATTTCAGAACACTTTCTTCTCACGGCAAAGCCTCTGGCAAAATATGTCATGCCAGTGTTGCACGAAAAAGAACATTATAGAGTCTTTTATGGAAATGATTCCTTTTATGTGCTGTTTAGATTACATCAGAAATTGTACGAGAGGATTCGGTCGGCAAAGGTTAACTCGTCCTCTGATGAAAGGAAATGGGGGACTACAAATGATACTAGCTCTACTGAACAATATGGCAGGTTCTTGAATTCTCTTTATGACTTCCTGGACGGTTCTTCTGATAATACGAAGTTTGAGGATGACTGTCGAGCTATTGTTGGAACTCAGTCATATGTTTTGTTCACAATAGACAAGCTAATATATAAACTTGTTAAACATCTTCAAGCTGTTGCAGATGATGAGATGGATAACAAGCTTCTTCAATTATATGCACATGAGAAATCAAGAAAACCTGAAAGATTTTTTGATACAGTCTATCATGACAATGCTCGCATTCTTCTTCACGATGACAATATATATCGAGTTGAATGTTCACCTGCACCTACTCGTTTGTCTATTCAACTGATGGACTACGGGCGTGATAAGCCCGAAGTGACTGCTGTGTCAATTGACCCAAAATTTTCAGCATATCTGCACAACGACTTCCTAGCTGTTGTCCCTGACCAAAATAAGAAGTCTGGAATTTTCTTGAATAGGAATAAACGCAAATATCCCGTTGTCGATGAATTTACCAGCCAGGCCATGGATGGAGTCGACGTTTTCAATGGCTTGGAGTGCAAGATAGCTTGCAGTTCGTCTAAGGTAGTTTCATATGTTTTAGATACCGAAGACTTTTTAATACGAACAAGAAGCAGAAGGAGAACCTTGCATCATAACAATTCATTCCATGAAAAGGCCAAGCCTTCAGAGAAATGTTCAAGCAGAGCTCAACGGTATCACCAGTTGTTTACAATCACATGA 4275 0.403 MVICLQFGSGIVARGCYLDAYMRSQIKRPMVSSRGAASRQPHVAIDNTVQKPTQDDAVKYLKTVKDAFHDKPEKYANFLQVMKDFRAQRIDTAGVIARVKELFKGHRNLILGFNTFLPKGYEITLPLEDEQPQQKKPVEFVEAINFVGKIKSRFQGDDRVYKSFLDILNMYRKETKTISEVYLEVAALFRDHEDLLEEFTHFLPDNSVSASTHYTSARNSILRDKSSAMPTIRPMHVDKKERTTASHGERDLSVEHPDQELDKSLVRADKDQKRRAEKEKDRREERDRRERERDDRDYDVDCNRDSLSHKRKSGRRTDDSGAEPFHEEDENFDLRPMSSTCEDKSSLKSMCSQVVAFLEKVKEKLRTPEVYQEFLKCLHIYSREIITRQELQSLVGDLLGKFPDLMEGFNEFLAQCEKNESLRNEGHGLKALKVEERDRDRDRDKVEGVKERDRECRERDKSTAAAANKDVFVPKMSPYATKDKYLAKPINELDLSNCEQCTPSYRLLPKNYPIQIPSQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQFEDILFRCEDDRYELDMLIESVNVAIKRVEELLEKINTNIIKGDSPIRIEEHFTALNLRLIERLYGDHGLDAMDWLRKDAPRFLPVILNRLRQKHVECVRMSVACKPEWAKVHAANHHKSLDHRSFYFKQQDKKSLSNKALLTEIKEISEKKWKDDVLLAIAAGNRRPLLPNLEFEYPDPEIHEDLYQLIKYSCGELCTTEQMDEVLKIWTTFLEPMLGVPSRPQSCEDTDDIVKAKSNSSRSGTSNDSNGNDSHGFGATPNNLNTNENRDESIPLAQSNSFKEWLANGDSGVKESSHLDSDRTSYKIETLGSNTQQGKIHMIASIPDEVSRINKQDHPIEKLASANISVASGMEQNGRTNIDNTSGLTSPPSGPGNVSGEGGLGLPPSKPADSTKPVTSSNGVITEGTKVHRPKDESVGHFKSDREEGELSPNGDFEEDNFAVYGEAGLEGVIEGKDSSTSRQYQSRHGEEVCGEAGGRNDLDDEGEESPHRSSEDSDHALENGDVSGSESADGDDFTREEKEGRDQEHNNKAESEGEAEEMADGNDVEGDSSLVPISEHFLLTAKPLAKYVMPVLHEKEHYRVFYGNDSFYVLFRLHQKLYERIRSAKVNSSSDERKWGTTNDTSSTEQYGRFLNSLYDFLDGSSDNTKFEDDCRAIVGTQSYVLFTIDKLIYKLVKHLQAVADDEMDNKLLQLYAHEKSRKPERFFDTVYHDNARILLHDDNIYRVECSPAPTRLSIQLMDYGRDKPEVTAVSIDPKFSAYLHNDFLAVVPDQNKKSGIFLNRNKRKYPVVDEFTSQAMDGVDVFNGLECKIACSSSKVVSYVLDTEDFLIRTRSRRRTLHHNNSFHEKAKPSEKCSSRAQRYHQLFTIT 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03823 1424 MobiDBLite consensus disorder prediction 907 927 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 234 337 - -
Adu03g03823 1424 Gene3D Paired amphipathic helix 345 418 IPR036600 GO:0006355
Adu03g03823 1424 SUPERFAMILY PAH2 domain 133 205 IPR036600 GO:0006355
Adu03g03823 1424 Pfam Paired amphipathic helix repeat 73 117 IPR003822 GO:0006355
Adu03g03823 1424 Pfam Paired amphipathic helix repeat 369 413 IPR003822 GO:0006355
Adu03g03823 1424 Pfam Paired amphipathic helix repeat 160 203 IPR003822 GO:0006355
Adu03g03823 1424 ProSiteProfiles PAH domain profile. 136 206 IPR003822 GO:0006355
Adu03g03823 1424 MobiDBLite consensus disorder prediction 788 822 - -
Adu03g03823 1424 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 17 1395 - -
Adu03g03823 1424 SUPERFAMILY PAH2 domain 50 119 IPR036600 GO:0006355
Adu03g03823 1424 ProSiteProfiles PAH domain profile. 347 416 IPR003822 GO:0006355
Adu03g03823 1424 Coils Coil 570 590 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 1007 1104 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 907 990 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 1013 1055 - -
Adu03g03823 1424 Coils Coil 266 295 - -
Adu03g03823 1424 SUPERFAMILY PAH2 domain 351 416 IPR036600 GO:0006355
Adu03g03823 1424 PANTHER SIN3B-RELATED 17 1395 IPR039774 GO:0003714
Adu03g03823 1424 SMART hdac_interact2seq4b 497 597 IPR013194 -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 219 345 - -
Adu03g03823 1424 ProSiteProfiles PAH domain profile. 49 120 IPR003822 GO:0006355
Adu03g03823 1424 Gene3D Paired amphipathic helix 134 207 IPR036600 GO:0006355
Adu03g03823 1424 MobiDBLite consensus disorder prediction 1064 1091 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 960 982 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 944 958 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 436 460 - -
Adu03g03823 1424 MobiDBLite consensus disorder prediction 772 822 - -
Adu03g03823 1424 Pfam Sin3 family co-repressor 499 590 IPR013194 -
Adu03g03823 1424 Pfam C-terminal domain of Sin3a protein 1137 1384 IPR031693 -
Adu03g03823 1424 Gene3D Paired amphipathic helix 56 118 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03823 Adu-Chr3 126905405 126942279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03823 53 132 WRKY Transcription Factor Family AT4G12020 57.500 1.12e-19 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g03823 Sin3a_C 3.4e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03823 K11644 - gmx:100781798 1909.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03823 03 126905405 126942279 Adu03g03823 03 126905405 126942279 ECH
Adu05g01619 05 30102634 30114892 Adu03g03823 03 126905405 126942279 PCT