Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03820 ATGGCTTTGAATTTCATGCTTCTTCAACCAAGGATTCTTCTTCTACTGACCCTTCTTGTGTTTTCTGTTTGTTTTTTATTACCAAAATGCCATTCTCAAACCACTTCACCTCAAAACATTGAAACTTTCTATCCTAATGAAACTTCAGCTCCACCACCGGCGGCCACGCAGAGGCCTGAGGCTCCGAAAGAGCCTCAAACCTCGCTGCAGCCGCCGGTGGCTGCACCTAGAAGAAGTAGTAATTCATCATCAAGTGGTAAGGTGGCTAAAGCTGTAGCTGCAACTGCTGCAACCACCATAGTTGTTTGTGGTTTTCTCTTCTTTTTAGTCCACATGTGCTTAAAGGCAAGAAAGAGAGAGGAGGTAACAACCAATAACAATGCTCCGGCGGTGGCGCCTCAAGGGAACGCGTTCGAGAAAATCGAAGGGAATGTGAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAAAGATCCAAGAAGGATCTTCATAAGGAGATTCTCAGAAACAAAGAAGAAGAAGAAGAAAATAATGTCAAGAAATCTAAATCCATTCAAGAAACCCCTCTTCTCAGAGGAAAATCTTCAACCTCACACATGAACATAGTTCCAGAAGTGGATGAGCCATATCAGATGACAAGAATTCCCTCTCAAAATCAATCATTCATCCCTCCTCCTCCTCCTCCTCCAATTCCAGCAAGAAAATCATCATCAAAGAAAACACCACCTACTCCTACTGAAATGGTAGTTACCTCCACCAGCAAGAGGATGAACTCTTTGGGAAAAGGTGCAGTGGAATCAGGCACTGAGAATGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAATGTTGATCGCGGTTCATTCAGGGTTGATCAAGATCTTATGGTGGCTCTCTTCGGCTATGTTGCAGCAAACCGGAGATCTCCTAAGGGAAAGAATCCGAGCAACGATAAGGCAGCAGGGTCGACGAGAATTTTCCTTCTAGACTCAAGAAAATCACAGAACATTGCTATTGTTGTGAAATCTCTGGCAATCTCGCGAGACGAAATCATTGATGCAATGATTGATGGTAGAGGGCTTAATGCAGATAGCCTTGAGAAGCTTGTTAGAATTGCTCCAACACAGGAGGAGCAATCTCTTATCATAGAATACAAAGGAGACCCTGCAATTCTTGCTTCAGCTGAATCATTCCTCTTTCACATCCTTAAATCCGTTCCTTCGGCCTTTAAGCGCTTGAATGCCATGCTGTTCAGGTTGAACTACAGTTCTGAGATTCTAGAAATCAAGGAGTCTCTGCAGGTTCTTGAACTGGGGTGTAAAGAGCTTAGGAGCCAGAGAATCTTTGTGAAGCTTCTAGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGGACAGCCAGAGGTAATGCTCAAGCTTTCGATTTGGCTTCTCTGAGGAAACTCTCTGATGTCAAAAGCACAGATGGAAAAACCACATTGCTTCATTTTGTGGTGGAAGAAGTAGTCCGGTCCGAAGGCAAGCGCATTGCTCTTAACAGCTTCGAAATCAATGAGAAGAATGCAGGTTCAGATGAACAAAGAGAAAGGGAATATATAACATTAGGATTACCAATTGTAGGAGGGATTAGTTCTGAGTTTTCTAATGTCAAGAAAGCAGCAGTTATAGACTACAACACATTAGTTGCTTCAATCTCTGCCGTCTCCACGCGAATCATCGAAATTCAAGAACTAGTTTCCCAATGTGGGAATGGGGAAGGAGGCTATTTTGCCAAAGAGATGGATAATTTTGTTCAGAACTCTAAGGAGGAATTGAAATTTGTGAGGGAGGAGCAAGCAAGGGTAATGCAGGCTATCAAGAGAACAAGAGAATACTATCAAGGAGGAGCTTCAAGAGAGAGTGCAGAACAAAGTCTAAAATTGTTTGTGATTGTGAAGGATTTCATGGGGATGGTTGATCAAGCTTGCATCGAGATTGCGCGAAATATGCAGAAGAGGAAGACACACAAGGCAGCTTCTTATGGCTAG 2091 0.4328 MALNFMLLQPRILLLLTLLVFSVCFLLPKCHSQTTSPQNIETFYPNETSAPPPAATQRPEAPKEPQTSLQPPVAAPRRSSNSSSSGKVAKAVAATAATTIVVCGFLFFLVHMCLKARKREEVTTNNNAPAVAPQGNAFEKIEGNVKGLIVDEDGLDVIYWRKLEGKRSKKDLHKEILRNKEEEEENNVKKSKSIQETPLLRGKSSTSHMNIVPEVDEPYQMTRIPSQNQSFIPPPPPPPIPARKSSSKKTPPTPTEMVVTSTSKRMNSLGKGAVESGTENVKLKPLHWDKVNTNADHSMVWDNVDRGSFRVDQDLMVALFGYVAANRRSPKGKNPSNDKAAGSTRIFLLDSRKSQNIAIVVKSLAISRDEIIDAMIDGRGLNADSLEKLVRIAPTQEEQSLIIEYKGDPAILASAESFLFHILKSVPSAFKRLNAMLFRLNYSSEILEIKESLQVLELGCKELRSQRIFVKLLEAVLKAGNRMNAGTARGNAQAFDLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRIALNSFEINEKNAGSDEQREREYITLGLPIVGGISSEFSNVKKAAVIDYNTLVASISAVSTRIIEIQELVSQCGNGEGGYFAKEMDNFVQNSKEELKFVREEQARVMQAIKRTREYYQGGASRESAEQSLKLFVIVKDFMGMVDQACIEIARNMQKRKTHKAASYG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03820 696 MobiDBLite consensus disorder prediction 38 53 - -
Adu03g03820 696 MobiDBLite consensus disorder prediction 38 85 - -
Adu03g03820 696 MobiDBLite consensus disorder prediction 229 245 - -
Adu03g03820 696 SMART it6_source 275 688 IPR015425 -
Adu03g03820 696 MobiDBLite consensus disorder prediction 180 211 - -
Adu03g03820 696 PANTHER FORMIN-RELATED 232 692 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Adu03g03820 696 PANTHER FORMIN-RELATED 1 230 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Adu03g03820 696 MobiDBLite consensus disorder prediction 225 277 - -
Adu03g03820 696 SUPERFAMILY Formin homology 2 domain (FH2 domain) 233 690 - -
Adu03g03820 696 MobiDBLite consensus disorder prediction 246 269 - -
Adu03g03820 696 Gene3D Formin, FH2 domain 275 685 IPR042201 -
Adu03g03820 696 MobiDBLite consensus disorder prediction 192 211 - -
Adu03g03820 696 Pfam Formin Homology 2 Domain 278 673 IPR015425 -
Adu03g03820 696 Coils Coil 163 194 - -
Adu03g03820 696 ProSiteProfiles Formin homology-2 (FH2) domain profile. 273 696 IPR015425 -
Adu03g03820 696 PANTHER FORMIN-LIKE PROTEIN 1 230 - -
Adu03g03820 696 PANTHER FORMIN-LIKE PROTEIN 232 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03820 Adu-Chr3 126879487 126882040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03820 16 688 FH2 protein (formin) Gene Family AT1G70140 46.829 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03820 - - adu:107481275 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03820 03 126879487 126882040 Adu03g03820 03 126879487 126882040 ECH
Adu05g01611 05 29700922 29703535 Adu03g03820 03 126879487 126882040 PCT