Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03819 ATGGATTGTGACGGCGTCGTTTCAGGGGTGAGAATGGGAGAGGCTTCCGAAGAGGTTCACGTGTTGGCCGTTGATGACAGCCTCGTCGATCGCAAGGTCATTGAGCGCTTGCTCAAAATCCTAGCTTGTAAAGTGACTGCTGTGGATAGTGGACTGAGAGCACTGGAGTATCTTGGACTTGATCAACACAAAATTCCCTCTCAATCTAACGGTTTTGTTGAGGGTTTGAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGGGATGACCGGTTACGACCTCCTCAAGAAAATCAAGGAATCTTCCACGTTCAGAGAAATTCCAGTTGTGATTATGTCCTCTGAAAATATCTTGCCGCGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTCATAGTAAAGCCGGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACGGCGTTGGTGGTAGGATCAACAAGAGGAAGCTACCAGATACTACTGAACCTGATCTCTCTTCATCACCACCGTCGGATTCCTCATCGCTACTTTCATCATCACCCTCTATTTCTCCATCTCCACCGTCCATCATTGATTCCCCAATCAGACGGCTCAAAATGACCACCGCCACCCATGATTGA 630 0.4778 MDCDGVVSGVRMGEASEEVHVLAVDDSLVDRKVIERLLKILACKVTAVDSGLRALEYLGLDQHKIPSQSNGFVEGLKVDLIITDYCMPGMTGYDLLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYGVGGRINKRKLPDTTEPDLSSSPPSDSSSLLSSSPSISPSPPSIIDSPIRRLKMTTATHD 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03819 209 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Adu03g03819 209 SUPERFAMILY CheY-like 19 146 IPR011006 -
Adu03g03819 209 MobiDBLite consensus disorder prediction 165 189 - -
Adu03g03819 209 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Adu03g03819 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 14 200 - -
Adu03g03819 209 CDD REC_typeA_ARR 21 146 - -
Adu03g03819 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 200 IPR045279 GO:0009736
Adu03g03819 209 SMART REC_2 19 147 IPR001789 GO:0000160
Adu03g03819 209 Gene3D - 19 173 - -
Adu03g03819 209 MobiDBLite consensus disorder prediction 154 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03819 Adu-Chr3 126856383 126857743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03819 9 199 Response Regulator Gene Family AT1G59940 57.944 4.58e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g03819 Response_reg 1.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03819 K14492 - gmx:100527828 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03819 03 126856383 126857743 Adu03g03819 03 126856383 126857743 ECH
Adu05g01610 05 29541661 29543464 Adu03g03819 03 126856383 126857743 PCT