Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03783 ATGAACCCTGCAGTGATTTTCATCATAGTGATCTTAGCTATTGTGTTCTTGATCTCTGGTATCATTCAATTGGTTGTTAGATTCCTCATGAGGCAAAGGTCCTCTTCTTCATCAATTATACAATCAAATAGGTTCCCTGACATGTCTGAACCTGATGCATACCAGAGACAGTTACAGCAACTCTTCCATCTCCATGATTCAGGCTTGGATCAGGCCTTCATAGATGCTCTCCCAGTTTTCTACTACAGAGAGATCATAGGTTTGAAGGAACCATTTGATTGCGCAGTTTGCTTATGTCAATTCTCAGAACAAGACATGCTGAGATTGCTTCCACTTTGTAACCATGCTTTTCACATTGACTGCATAGACACATGGCTCATGTCTAATTCAACTTGTCCCCTTTGTAGAGGGAGCCTCTATGATCCAGGGTTTGCATTTGACAACCCAGTTTATGAATTTGAGGGTCCAATAAGGGAAGATGGGGTTTCAGGGAGTGGTGTTGGTGTTGGTGAGGCTGGTTCTGCCAATAACAAACATGGAGAAAGTCACATAATGAGTGGGAAAAGGGTGTTTTCTGTTAGGCTTGGGAAATTCAGGAGCTCAAATAATGGTGAAGGTGTGGTCATGGGAAGAGGTGAAGGAGAGAGTAGTAGTAGCACAAGTAATTTTGATGTGAGGAGGTGCTTCTCAATGGGGTCTTTTCAGTATGTGGTTGCTGATTCAGATTTGCAAGTGGCTTTATGCCCTGACACCAGTGGCAGTATGAGAAAATTGAAAGGAAGATTAGCTCCACAATATGGAAATTCTACTTCCATTGATGGGGATATTGAGGGGGAAAAAATCAACATTGCTAGAAAAGGTGAGAGCTTTTCTGTTTCAAAGATTTGGCTATGGTCTAGGAAGGATAAGAGGGATCAAGTAGCCATCTGTTTTGTTCCGGAATTTCCAGAAAAGCTATACTTGGTTGCTTGA 972 0.4198 MNPAVIFIIVILAIVFLISGIIQLVVRFLMRQRSSSSSIIQSNRFPDMSEPDAYQRQLQQLFHLHDSGLDQAFIDALPVFYYREIIGLKEPFDCAVCLCQFSEQDMLRLLPLCNHAFHIDCIDTWLMSNSTCPLCRGSLYDPGFAFDNPVYEFEGPIREDGVSGSGVGVGEAGSANNKHGESHIMSGKRVFSVRLGKFRSSNNGEGVVMGRGEGESSSSTSNFDVRRCFSMGSFQYVVADSDLQVALCPDTSGSMRKLKGRLAPQYGNSTSIDGDIEGEKINIARKGESFSVSKIWLWSRKDKRDQVAICFVPEFPEKLYLVA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03783 323 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 304 - -
Adu03g03783 323 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 2 304 - -
Adu03g03783 323 SMART ring_2 94 135 IPR001841 -
Adu03g03783 323 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Adu03g03783 323 Pfam Ring finger domain 93 136 IPR001841 -
Adu03g03783 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 141 IPR013083 -
Adu03g03783 323 CDD RING-H2_PA-TM-RING 93 136 - -
Adu03g03783 323 SUPERFAMILY RING/U-box 73 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03783 Adu-Chr3 126532623 126533918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03783 20 304 C3H Transcription Factor Family AT2G18650 38.019 1.08e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03783 - - gmx:100818135 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03783 03 126532623 126533918 Adu03g03783 03 126532623 126533918 ECH
Adu05g01499 05 25198661 25199611 Adu03g03783 03 126532623 126533918 PCT