Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03766 ATGATGAGCCCCCTTTTTCTCCTCATCCTCCTCTTCTCATCCCTCACTGTTGGTTTCTCCGGCAGCGGCGGAGACCAAAATCCGTTCACACCAAAGGCGTACGCGATGCGGTACTGGGACAAAGCCATTCAAAACACGCTTCCAAAGCCATCCTTCCTCACCTCCAAGGCCTCACCACTAACTGCCATTCAAGCCGCCAAGTACGCAAAACTTGCCGCCACCAACGCCCTCACCACGCGCCTCCCCGAGTTCTGCTCGGCTGCGCACCTCCTCTGCTTTCCTGACATCACGCCCAATCTCTCCAAGCGAGACAAGAGCCAAAGCTTCTCCGGCTACGAAGACGGCCAGAACTTCACCAGCTACGGCATCGGTGGTGCCGGAAGCGTCAACAACTTCAAGAACTACTCCGACGGCTTTTTCAACCCCGGGGTGAACGAGTTCCGCTCCTACAGCCGAAGCTCCGGTGGTGGCAGCGAGACCTTTACAGGCTATGGAGAAGGCACCAACGTCGTCGAGGAAGGCTTCAACACCTACGGCAAAGGTTCCGGAGGCGGCACCGGAGAATTCACACAGTACGCGACAAACTCAAACGTCCCAACCCTCCGGTTCTCGTCGTACGGCGAGGGAACCGGCGGCAGGCAAGAAAGTTTCTCCAAGTACAGCGACGACAGCAACGCCGGAGATCAGACGTTCTCGAACTACGGCAAAAACGCTGCCGGAGCCGTGAGCGAGTTCGACAGCTATGGTAACAACTCGAACGTGGCGTCGTCGACCTTTGGTAGCTACGGCGCCGGTGGCGCGGGGCAGAACGAGACGTTCACGAACTACGGGATAAACATGAACGTGCCTGAAGAGAATTTCAATAACTATGGGGCTCGAACCACCGGAGGAACGCAAGCATTCACGAACTATAGAAATCAGGCGAACGTCGGTGATACCTCGTTTTCTTCGTACGATAAGGGATCAAACCAAGGAGCGGCCAATTTCACCAGCTACGGCCAATCCTTCAATGAAGGCTCCGATACCTTTAAAGGCTACGCCGTCAATTCCACGGCGGCCAAGGCTGGGTTCAAAGAATACGGTGTGAACACGACCTTCAAGGATTACAACAAAGACGGTGTCTCCTTCTCCGGCTACACCAACGCCACCACTTCTTCCGCCCACATTAGTGGCAGTCTGGCCAAAAAATGGGTGGAACCAGGCAAATTCTTCCGCGAAAGCATGCTAAAGGAAGGCACTATTATGCCCATGCCGGACATCAAGGACAAGATGCCCAAAAGGTCATTTTTGCCCCGTTCCGTTTTGACCAAATTACCCTTCTCCACCTCCGAGCTCAAGCGCATCTTCAAGGCCTCCGATGAATCCTCCATGGACAAGATGATAAAAGACTCCATGGGAGAGTGCACCAGAGCTCCCAGCGCGGGGGAGACAAAACGATGCGTTGGATCTGTGGAGGACATGATCGACTTTGCAACTTCCGTTTTGGGGCGTGACATTACCGTTAGAAGCACCGAGAACGTTAAGGGGTCAAAGAAGAATGTGATGGTGAGTAAGGTCAAAGGGATCAACGGTGGGAAAGTAACCAAATCTGTTTCTTGCCATCAGAGCTTGTTCCCTTACTTATTGTATTACTGCCACTCGGTTCCTAAGGTTCGGGTTTACGAAGCGGATCTTTTGGACCCGAATACAAAAGCTAAGATTAACCACGGTGTTGCCATCTGTCACTTGGACACCACTGCTTGGAGCCCAACACATGGCGCATTCATGGCCCTTGGATCGGGTCCTGGTAAGATTGAAGTTTGCCATTGGATCTTTGAGAACGATATGACTTGGACCATTGCTAATTGA 1848 0.5308 MMSPLFLLILLFSSLTVGFSGSGGDQNPFTPKAYAMRYWDKAIQNTLPKPSFLTSKASPLTAIQAAKYAKLAATNALTTRLPEFCSAAHLLCFPDITPNLSKRDKSQSFSGYEDGQNFTSYGIGGAGSVNNFKNYSDGFFNPGVNEFRSYSRSSGGGSETFTGYGEGTNVVEEGFNTYGKGSGGGTGEFTQYATNSNVPTLRFSSYGEGTGGRQESFSKYSDDSNAGDQTFSNYGKNAAGAVSEFDSYGNNSNVASSTFGSYGAGGAGQNETFTNYGINMNVPEENFNNYGARTTGGTQAFTNYRNQANVGDTSFSSYDKGSNQGAANFTSYGQSFNEGSDTFKGYAVNSTAAKAGFKEYGVNTTFKDYNKDGVSFSGYTNATTSSAHISGSLAKKWVEPGKFFRESMLKEGTIMPMPDIKDKMPKRSFLPRSVLTKLPFSTSELKRIFKASDESSMDKMIKDSMGECTRAPSAGETKRCVGSVEDMIDFATSVLGRDITVRSTENVKGSKKNVMVSKVKGINGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPNTKAKINHGVAICHLDTTAWSPTHGAFMALGSGPGKIEVCHWIFENDMTWTIAN 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03766 615 ProSiteProfiles BURP domain profile. 403 614 IPR004873 -
Adu03g03766 615 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 614 - -
Adu03g03766 615 Pfam BURP domain 403 612 IPR004873 -
Adu03g03766 615 MobiDBLite consensus disorder prediction 205 225 - -
Adu03g03766 615 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 614 - -
Adu03g03766 615 SMART BURP_2 401 614 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03766 Adu-Chr3 126282414 126309433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03766 - - gmx:100811362 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03766 03 126282414 126309433 Adu03g03766 03 126282414 126309433 ECH
Adu05g01474 05 24194543 24197664 Adu03g03766 03 126282414 126309433 PCT