LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g03762	ATGGCTCAGAAAAAGAAGAAAGACAGCGATTCTTCTTCTTCTTCTGATTCTTCTGATTCTTCTTCTCCGTCTTCTACTAATAATTCTCTTTCTACTCGTCGTCAAGACAATGATGATAATAAGGACACTTCCTCTTCTTCTTCATCTTCATCTTCATCTTCATCCGATTCTAACGCCAGCAACCGCCAAAACAAGAATCAGCGTAAAGTTAAACCGCCGCCGCCACCAATTTCTGATGCTTCCGATTCCTCACCGACTTCTCCGGCGAAGGAGGATACTCGCTCGCCGCCATCGTCCCGGAATCCTCCACCGCCGTCTGAAGATTTGACTCCACCGGAGCGCTCACCACCACCGCCAGAGGCATTGCCGCCGCCGTCACCACCACCACCAGAAGTGTCGCCTCCACCACCACCACCACCAGAAGTGTCGCCTCCACCACCACCACCACCAGAAGTGTCGCCTCCACCGCCGTCGTTTCCACCACCACCGGCACAGATACAAAATGAAGTCGCTTCTACTCCTCCTCCTCCTCCACCATATACAGCACCACCTTCTCCTCCTCCTCCTTATTCTCCTTCTCCACCTCCTCCTCCTTCTACTCCCGTCCGACCCGCCTCCGCTAACTCGCAACCGAAGCCAGACATTGCCACGGATTCACCACCGAGCTTTGGTAAAGCCACAGGCAATACTGATATAGGAAAATTTGCCGGCTATACCCTTGCTGCGGTTTTCTTCTTGGCCTTGGTGGCTGTAACTTTCTTCATGTTCAGGAAGAAGAAATCAAGAGGAGATGTCTATGGTATACCTCGCCATAATCTTCACTTTCACGTTAGACCAGGTGTTAATAGAATTTACTATGGACAGAAGGCTGGCGTTGGAAATGGACCAATATTGTCTCCCAATAGAAGCAACCATGGAAGTGCAAGAAATCCTGGAAGCAGACTTTTAGCACCTTCAGACATAGGGCAACAGGTGAATGCTCCAGTAGCCTTTAGCTATGAAGACATCTTGCAGGTAACCAATTCATTCTCTGATGAAAACGTCATAGGTGAAGGAGGGTTTGGGCATGTTTACAAAGGGACACTGCCGGACGGAAAGGTGGTCGCGGTTAAGAAGCTAAAGGTTGGCAGCGGCCAGGGGGAAAGGGAATTCAGGGCAGAAGTGGAGATCATCAGCCGTGTCCATCACAGGCATTTGGTATCTTTAGTTGGTTATTGCATATGTGAGGATCAAAGATTGCTCGTCTATGAGTATGTTCCTAATGGGACACTCCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGACATGGGACAAGAGGTGCAAGATCGCTATTGGTGCTGCAAAGGGTTTGGCATATCTGCATGAGGAATGTATCCAAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGATGATACTTTCGAGGCTCAGGTTGCAGATTTTGGACTTGCAAGGCTAACTGACACTACCAAAAGTCATGTATCAACTAGGGTTATGGGAACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGGAAATTAACTGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTCTAACAGGAAGGAAACCAGTTGATGACTCTCAGCCTTTAGGAGATGAGAGTTTGGTTGAATGGGCTCGTCCGCATCTCCTCCATGCAATGGAGACACATGACTATAGTGTGCTAGTAGATCCAAGACTTCAAAATCAATTTGCGGAGGCTGAAATGCTCAGGATGATTGAGGCGGCCGCGGCTTGTGTTCGCCACTCTGCTCCTAAACGGCCTCGAATGGTTCAGGTTGTAAGAGCCTTAGATAGTGGAGCTGAAATATCTGATCTATCTAATGGGGTGAAATATGGTCACAGTACCAACTATGATTCTAACCAGTATGATAAAGACATTAGGATGTTCAGGAGAATGGCCAACGGCAGCTATGGTGGTGACTCTGATTCCGATAAGTACAGTAAAGAAAGCAGTCTCTCAAGAGAAATGTCAACTTGTGGATCCCAAAATGGATCCGGGACAAGTAGTTCTAGCAGCGACTTAGAATCCATAGCACTCACCAAGCATAGTAGAAGTTCTTCGTAG	2124	0.4746	MAQKKKKDSDSSSSSDSSDSSSPSSTNNSLSTRRQDNDDNKDTSSSSSSSSSSSSDSNASNRQNKNQRKVKPPPPPISDASDSSPTSPAKEDTRSPPSSRNPPPPSEDLTPPERSPPPPEALPPPSPPPPEVSPPPPPPPEVSPPPPPPPEVSPPPPSFPPPPAQIQNEVASTPPPPPPYTAPPSPPPPYSPSPPPPPSTPVRPASANSQPKPDIATDSPPSFGKATGNTDIGKFAGYTLAAVFFLALVAVTFFMFRKKKSRGDVYGIPRHNLHFHVRPGVNRIYYGQKAGVGNGPILSPNRSNHGSARNPGSRLLAPSDIGQQVNAPVAFSYEDILQVTNSFSDENVIGEGGFGHVYKGTLPDGKVVAVKKLKVGSGQGEREFRAEVEIISRVHHRHLVSLVGYCICEDQRLLVYEYVPNGTLHHHLHGSGMPVLTWDKRCKIAIGAAKGLAYLHEECIQKIIHRDIKSANILLDDTFEAQVADFGLARLTDTTKSHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDDSQPLGDESLVEWARPHLLHAMETHDYSVLVDPRLQNQFAEAEMLRMIEAAAACVRHSAPKRPRMVQVVRALDSGAEISDLSNGVKYGHSTNYDSNQYDKDIRMFRRMANGSYGGDSDSDKYSKESSLSREMSTCGSQNGSGTSSSSSDLESIALTKHSRSSS	707

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g03762	707	SUPERFAMILY	Protein kinase-like (PK-like)	321	616	IPR011009	-
	Adu03g03762	707	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	73	681	-	-
	Adu03g03762	707	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED	73	681	-	-
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	1	225	-	-
	Adu03g03762	707	ProSiteProfiles	Protein kinase domain profile.	343	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	672	707	-	-
	Adu03g03762	707	Gene3D	Phosphorylase Kinase; domain 1	314	418	-	-
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	205	225	-	-
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	97	204	-	-
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	14	33	-	-
	Adu03g03762	707	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	463	475	IPR008271	GO:0004672\|GO:0006468
	Adu03g03762	707	ProSitePatterns	Protein kinases ATP-binding region signature.	349	372	IPR017441	GO:0005524
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	82	96	-	-
	Adu03g03762	707	CDD	STKc_IRAK	349	617	-	-
	Adu03g03762	707	Pfam	Protein tyrosine and serine/threonine kinase	346	616	IPR001245	GO:0004672\|GO:0006468
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	42	68	-	-
	Adu03g03762	707	SMART	serkin_6	343	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu03g03762	707	Gene3D	Transferase(Phosphotransferase) domain 1	419	634	-	-
	Adu03g03762	707	MobiDBLite	consensus disorder prediction	657	707	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g03762	Adu-Chr3	126179254	126182686	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g03762	188	672	Trihelix Transcription Factor Family	AT1G70460	58.434	0.0	550

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Adu03g03762		PK_Tyr_Ser-Thr	2.8e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g03762	-		-	lang:109330554	588.571