Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03761 ATGAGTGATTCTACGGTTTTAGAGTGGCTTAGGCCCTTTGTTGAGGCCAAAGCTTGGGACTTTGTGGTTGTTTGGAAATATGGGGATGACCCTACTAGGTTCTTCATTGAGTGGTTGGGTTGTTGCTGTAGTGGGAGCTGTGGTGAAAGCATTGAGGATGCAAAGAAGCTCAAAGATGAAGAAATGGATGAAAAACAGAACGACATAGATTCTTCTTCCATTTGCAAGGATGCACATTTTCAGCATCCAATTAGAACCAAGGCTTGTAAGGCTCTTTATCAGCTTCCTTTTGCAATGTCTCTCTATTCTGGTGTCCATGGAGAGGTTGCAATATCGCAGCAACCAAAATGGCTTACTCATGGAGAGGAAATTGGAACACAAGTTTTGATCCCTGTTGTTGGTGGTCTTGTTGAGCTCTTCACGACAAAGCTTGTTCCAAAAGACAATAACATCTTAGAGTTCATAAGAGCACATTGCTATGTTTCATTGAAGCAAGAAGCTATATGTGCACAGCACCACACCGATGTGAACTTCAGTGAAAATCTGTCATCAGAAGAACAATACACACAGAGCTCGCCACAACTTGCGTCAACTTTAACTGACGGTGTCCATCTTCTTGCAGCAAACTGGTGCAAATCGGATCCTTACATTGAAGAACCTTCCAGTGGATCTAATCCTTCAAGCGAATACACATCATTTGATTCGAAATTTGTCTGCTTGACTCACCATGAATATCTGGGTGAGTCGGTTAAATTATCACCTACCTGCAAAACCGAAAGGCCTAAGTACAATGAAACTTCAGGGAAGCAGCAAGGAACTTTGAGTTCCTATTGTGGCAATGGCAAAAGAAATAAAACAAAATCAGTCAGGATGGATAGAGCATCAATTCTAGCAGATGCAATTGACTACATTAAGGAACTGCATGGACAAGTAGAAGATCTAAAAGATGAGGTCAGGAATTTGGAAGTAGAAGACTGCGAAAAGAACACACCGCAATCAATTATGCCAACAAGTAAAGAACAAGGAGAAAACAGAACTCTCCTTGCTGAGCTCAATCAAAGTTCTTCTAATTCCACTAAACAGATAGAGATGAAGATGCAAACCGAAGTGAATCATATAAGCAGGACAGAGTTCTTGCTTAAGGTATGCTGGGAGCAGAAGCCAGGTGGGTTTTCAAGGTTGATGGAAGCTATAAATTCATTTGGATTTCAGGTGGAAACTGCCAATATGACCACAATTGACGGAAAGGCTCAGATCATTCTAACAGTTGAGGCAGCCAAGGAGGGAATTCACCCAACTAAGCTGAAGGATTTTTTGACAGAGCAAACAGGTTGA 1335 0.4165 MSDSTVLEWLRPFVEAKAWDFVVVWKYGDDPTRFFIEWLGCCCSGSCGESIEDAKKLKDEEMDEKQNDIDSSSICKDAHFQHPIRTKACKALYQLPFAMSLYSGVHGEVAISQQPKWLTHGEEIGTQVLIPVVGGLVELFTTKLVPKDNNILEFIRAHCYVSLKQEAICAQHHTDVNFSENLSSEEQYTQSSPQLASTLTDGVHLLAANWCKSDPYIEEPSSGSNPSSEYTSFDSKFVCLTHHEYLGESVKLSPTCKTERPKYNETSGKQQGTLSSYCGNGKRNKTKSVRMDRASILADAIDYIKELHGQVEDLKDEVRNLEVEDCEKNTPQSIMPTSKEQGENRTLLAELNQSSSNSTKQIEMKMQTEVNHISRTEFLLKVCWEQKPGGFSRLMEAINSFGFQVETANMTTIDGKAQIILTVEAAKEGIHPTKLKDFLTEQTG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03761 444 MobiDBLite consensus disorder prediction 259 283 - -
Adu03g03761 444 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 157 IPR025610 -
Adu03g03761 444 MobiDBLite consensus disorder prediction 258 284 - -
Adu03g03761 444 PANTHER TRANSCRIPTION FACTOR BHLH90 70 443 - -
Adu03g03761 444 Coils Coil 297 324 - -
Adu03g03761 444 ProSiteProfiles ACT domain profile. 379 444 IPR002912 -
Adu03g03761 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 325 IPR036638 GO:0046983
Adu03g03761 444 Gene3D - 254 329 IPR036638 GO:0046983
Adu03g03761 444 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 70 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03761 Adu-Chr3 126176239 126178759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03761 287 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 38.686 1.64e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03761 - - gmx:100807261 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03761 03 126176239 126178759 Adu03g03761 03 126176239 126178759 ECH