LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g03739	ATGGAACTTAGTAGTTCAGTTTCATGGCTACTTGGTTTACTTCTTTTGGCTATGGTGGAAATGTCTTCTTCTGCTCTTTCTCCTTCCGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATTAAGAATGGCTTGAATGATCCCCACAATGTCCTTGAGAATTGGGATATCAATTCTGTTGATCCTTGTAGCTGGAGGATGATTACTTGTTCTCTAGATGGCTCCGTTTCTGCATTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTATCTCCAGGGATTCAAAACCTTACTAACTTGCAATCAGTTGGTGAGATACCAAGTTCTTTGGGAGGCCTCACAAGCCTGAACTACCTGCGGTTGAACAATAACAGCCTTACCGGAGGATGCCCTCAGTCTCTTAGTAACATTGAAGGTCTAACACTTGTGGACCTCTCTTATAACAATTTGAGTGGTTCTTTGCCAAGAGTAACAGCAAGAACATTCAAGATTGAGGGTAACCCGTTAATATGTGGTCCAAAAGCAAATAACTGTTCTAATGTGTTGCCAGAACCACTTTCCTTCCCTCCAGATGCTCTAACAGCTCAATCAGACTCTAGCAACAAAAGCCATCGTGTTGCAGTTGCTTTTGGTGCGAGTTTCGGTTCTGCTTTTATCATTGTAATTATTGTTGTGTTTCTCGTTTGGCGGCGATACAGACAGAATCAGCAGATATTCTTTGATGTTAGCGAGCAATACGACCCTGAGGTGCGCCTTGGTCATTTGAAGAGGTATTCATTCAAAGAGCTTAGAGCCGCAACAGACCATTTCAGTTCAAAGAATATTTTAGGAAAGGGTGGCTTTGGAATAGTCTACAAAGGGTGCTTGAATGATGGAACAATTGTGGCAGTTAAAAGGTTGAAGGATTACAATGCTGCTGGTGGTGAGATCCAATTTCAGACAGAGGTTGAGACAATAAGTTTGGCTGTGCACCGGAATCTTCTGCGTCTCAGTGGATTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCTTATATGTCCAATGGCAGTGTAGCCTCTAAATTAAAAGATCATGTTCATGGTCGGCCAGCCTTAGATTGGGTGAGGAGGAAGAGAATAGCGATAGGTACAGCAAGGGGGTTGGTTTATTTGCATGAACAATGTGATCCGAAAATTATTCATCGTGATGTCAAAGCAGCCAATATATTGCTAGATGAAGATTTCGAAGCAGTTGTTGGCGATTTTGGTTTGGCTAAGCTTCTGGATCACAGAGATACTCATGTGACAACTGCTGTCCGCGGAACTGTCGGCCATATTGCTCCAGAGTACTTATCAACAGGTCAGTCATCAGAGAAGACTGATGTGTTTGGGTTTGGAATCTTGCTTCTTGAGCTAATCACAGGCCATAAGGCTGTAGATTTCGGGCGAGCAGCAAACCAGAAGGGCGTCATGCTTGATTGGGTTAAGAAGCTCCACCAAGATGGAAGATTAAGCCAAATGGTGGACAAAGATCTAAGAGGAAGTTTTGATTTGCTTGAGTTGGAAGAAATGGTTCAGGTAGCATTATTATGCACACAATTCAAGCCTTCGCATCGCCCGAAGATGTCAGAAGCATTGAAGATGTTGGAAGGTGATGGATTAGCTGAGAGATGGGAGGCCTCACAGTCACACAAGATTGAAACACCAAGGCTCCGATCTAGTAATAGTGAAAATAACCCTCAAAGATATTCAGATTTCATAGAAGAATCTTCACTCATATTAGAAGCTATGGAGCTTTCTGGCCCAAGGTGA	1794	0.4292	MELSSSVSWLLGLLLLAMVEMSSSALSPSGINYEVVALMAIKNGLNDPHNVLENWDINSVDPCSWRMITCSLDGSVSALGLPSQNLSGTLSPGIQNLTNLQSVGEIPSSLGGLTSLNYLRLNNNSLTGGCPQSLSNIEGLTLVDLSYNNLSGSLPRVTARTFKIEGNPLICGPKANNCSNVLPEPLSFPPDALTAQSDSSNKSHRVAVAFGASFGSAFIIVIIVVFLVWRRYRQNQQIFFDVSEQYDPEVRLGHLKRYSFKELRAATDHFSSKNILGKGGFGIVYKGCLNDGTIVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQNERLLVYPYMSNGSVASKLKDHVHGRPALDWVRRKRIAIGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDTHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKAVDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLRGSFDLLELEEMVQVALLCTQFKPSHRPKMSEALKMLEGDGLAERWEASQSHKIETPRLRSSNSENNPQRYSDFIEESSLILEAMELSGPR	597

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g03739	597	PANTHER	PROTEIN NSP-INTERACTING KINASE 3	6	103	-	-
	Adu03g03739	597	MobiDBLite	consensus disorder prediction	554	576	-	-
	Adu03g03739	597	Gene3D	Phosphorylase Kinase; domain 1	239	346	-	-
	Adu03g03739	597	SMART	serkin_6	270	543	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu03g03739	597	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	393	405	IPR008271	GO:0004672\|GO:0006468
	Adu03g03739	597	PANTHER	PROTEIN NSP-INTERACTING KINASE 3	104	597	-	-
	Adu03g03739	597	SUPERFAMILY	Protein kinase-like (PK-like)	247	544	IPR011009	-
	Adu03g03739	597	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	6	103	-	-
	Adu03g03739	597	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	104	597	-	-
	Adu03g03739	597	MobiDBLite	consensus disorder prediction	561	576	-	-
	Adu03g03739	597	Gene3D	Ribonuclease Inhibitor	31	103	IPR032675	-
	Adu03g03739	597	Gene3D	Ribonuclease Inhibitor	104	180	IPR032675	-
	Adu03g03739	597	ProSitePatterns	Protein kinases ATP-binding region signature.	276	298	IPR017441	GO:0005524
	Adu03g03739	597	Pfam	Protein kinase domain	271	541	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu03g03739	597	SUPERFAMILY	L domain-like	32	159	-	-
	Adu03g03739	597	Pfam	Leucine rich repeat N-terminal domain	32	71	IPR013210	-
	Adu03g03739	597	Gene3D	Transferase(Phosphotransferase) domain 1	347	563	-	-
	Adu03g03739	597	ProSiteProfiles	Protein kinase domain profile.	270	553	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g03739	Adu-Chr3	125964353	125967637	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g03739	67	597	Receptor kinase-like Gene Family	AT1G60800	69.542	0.0	759

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Adu03g03739		Pkinase	4.6e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g03739	-		-	gmx:100806943	1009.98