Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03711 ATGGAAGAAGCGTTTAGGCGTCTCAACGGCATGCCTCCNTACGCGGCGGAGATAAGGGACCCGCAGTCGAAGGAGCGGCGGTGGCTGGGGACGTTCGACACGGCGGAGGAAGCTGCCTGCGCCTACGACTGTGCCGCCAGAGCGATGCGAGGCGCGAAGGCGAGGACGAACTTCGTGTACCCTGATTCTCCTCCTCATCCTCGTCCACACCATCACCATCACAATTTTCGTCACTCTGAACTGTTCCAAGCGTTCAACTTCCCGAAGCAGCAGTGCCACGTCAGCAAGTTAGTTCAGAGTGGCCGCCATGGCGTAACTGCTCCATTATCGACTCAGCAGCAGCACCGAAACGTCGCTAACAATTCTCATCATTCCCTGAACATGCTTCTGTTCCGCGAGTTTCTGAATTCGAATCCGTGTTTGGTTTCTTCTTCTTCTGCTGCTGCTGGTGGTGTTGGTTCTAGTAGTGCTAATAATAGTCCTTATCAGTATTGCATGAAGGAGGGTGGTTCCGCTTGCTGCTTCAATGGTAACTGTTGCGGTGGTGGTTCCAACAACGGCACGACGGAGGTTATTGCTGAAGGTGTCGAGGAAGAAGATCAGTCGTTATTGGAGTTGTTCCCTAGAGAGTCTTCAAACTCTGGTCTGTTGGAAGAGATAGTTCAACGCTTCTTGCCGAAATCCAAAACCGTTCCAAACAAGAATTGCGACAGCACTTTGAAGCTGAAACCCGAGGCGGCGGCAGTTTCGTTTCCTCATCATCAACAACAACAACAACAGGGCTATGATGATGACAGCAGGATGATGAGGGGTTTTGATCATCAAAATTTTCCTGTTCAGCAATTTGATTATGGCTTTAACCCTATTCATGAGGCCTCATCGATGACCATGCCTGTGGGGAACGAACAGTTGATGATGAACCCTACTGCTATGCTGGAAGATGCTTTTCAGTATCAACAATTTCTCAATGCCTTCGCGGCCAGAATGCAGAATGCTTAA 999 0.5015 MEEAFRRLNGMPXYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGAKARTNFVYPDSPPHPRPHHHHHNFRHSELFQAFNFPKQQCHVSKLVQSGRHGVTAPLSTQQQHRNVANNSHHSLNMLLFREFLNSNPCLVSSSSAAAGGVGSSSANNSPYQYCMKEGGSACCFNGNCCGGGSNNGTTEVIAEGVEEEDQSLLELFPRESSNSGLLEEIVQRFLPKSKTVPNKNCDSTLKLKPEAAAVSFPHHQQQQQQGYDDDSRMMRGFDHQNFPVQQFDYGFNPIHEASSMTMPVGNEQLMMNPTAMLEDAFQYQQFLNAFAARMQNA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03711 332 ProSiteProfiles AP2/ERF domain profile. 1 59 IPR001471 GO:0003700|GO:0006355
Adu03g03711 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 332 - -
Adu03g03711 332 Pfam AP2 domain 14 51 IPR001471 GO:0003700|GO:0006355
Adu03g03711 332 SMART rav1_2 4 65 IPR001471 GO:0003700|GO:0006355
Adu03g03711 332 Gene3D AP2/ERF domain 5 60 IPR036955 GO:0003700|GO:0006355
Adu03g03711 332 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 14 332 - -
Adu03g03711 332 CDD AP2 6 58 IPR001471 GO:0003700|GO:0006355
Adu03g03711 332 SUPERFAMILY DNA-binding domain 12 59 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03711 Adu-Chr3 125618351 125619349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03711 14 229 AP2-EREBP Transcription Factor Family AT1G12980 37.500 3.12e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu03g03711 AP2 4e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03711 - - adu:107481147 600.897