Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03693 ATGCACTCTCACTCCCTCCTTTCAATGGAAACGCTCACCACCTCCTCCTCCATCTACCATCAATCTCTGCCTCCTACTCCTCCTCCTCATTACTACTTCCTCTACGCCAACGGGACCACTGACCTCAAGCCTGAGGGACTCGACGGTACTTCCCAACTGGATCATAACATCATGTCCCAACAACCTTCTTTCTTCATCAACCCAAACCTTCAGCCACCACAACCCCTCCTGCCAAAGCTCGAATATTTCTTTCAAACCGACAGAAATGATGATGATGATTCCTCTTCCCTCACCCAAGATCTGAAAGCGCTTGCTGCTGACGCTGCCTTCCTAGCTTTCTCCTCTGCCAATTCGGTCTCTCAGGTGCTGGATGCTCACTCATCCCGGAACGATGACTTCGCGTTCTCCGCTAGTAAAGGCGGTAACTCCTCCAACTCCAAGAAGGTTGTTGGTGATACATTTGGCCAGCGAACTTCAATATACAGAGGTGTTACCAGACACCGATGGACGGGACGATATGAAGCTCACCTGTGGGATAATAGCTGCCGCCGAGAGGGTCAAGCCAGGAAAGGCCGTCAAGTAAAATGTCATGGTTTGTCAGGTGGATATGACAAGGAAGAAAAGGCCGCAAGAGCCTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACAGCTACCACTAACTTCCCTGTTTCTAATTATATAAAGGAATTGGAAGAGATGAAAGATGTAGGGAAGCTTGAATTTATTGCATCACTACGAAGGAGAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGGGGTGTTACAAGGCATCATCAACAAGGTAGATGGCAAGCGAGAATAGGCCGCGTTACAGGGAACAAAGATCTATACCTAGGGACATTTGCAAGTGAAGAGGAAGCGGCGGAGGCATACGATATTGCGGCAATAAAGTTCAGAGGGTTAAATGCAGTAACCAATTTTGAGACGAGTAGGTACAACGTGGAAGCCATAATGAATAATTCTCTTCCCGTTGGCGGGGTAGCCAAACGGTTGAGGCTTTCCCTAGAATCAGAGAAGGAAGAAGCTGCTACTTCTACTACTAATACTCACCAGCCACCTAAGACTGAGAGTGAGAGTAGCATCATGACATTGTCAACCATTCCGGCTCCTCCTGCACACTTTGATTCTGTGACACCATATTGCTACCAATTTCATTCCCCCGATGCCGTTAACGATGCCATCATGCCAATGTAA 1242 0.4807 MHSHSLLSMETLTTSSSIYHQSLPPTPPPHYYFLYANGTTDLKPEGLDGTSQLDHNIMSQQPSFFINPNLQPPQPLLPKLEYFFQTDRNDDDDSSSLTQDLKALAADAAFLAFSSANSVSQVLDAHSSRNDDFAFSASKGGNSSNSKKVVGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVKCHGLSGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYIKELEEMKDVGKLEFIASLRRRSSGFSRGASIYRGVTRHHQQGRWQARIGRVTGNKDLYLGTFASEEEAAEAYDIAAIKFRGLNAVTNFETSRYNVEAIMNNSLPVGGVAKRLRLSLESEKEEAATSTTNTHQPPKTESESSIMTLSTIPAPPAHFDSVTPYCYQFHSPDAVNDAIMPM 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03693 413 SUPERFAMILY DNA-binding domain 265 325 IPR016177 GO:0003677
Adu03g03693 413 Gene3D AP2/ERF domain 266 326 IPR036955 GO:0003700|GO:0006355
Adu03g03693 413 Gene3D AP2/ERF domain 160 232 IPR036955 GO:0003700|GO:0006355
Adu03g03693 413 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 PRINTS Ethylene responsive element binding protein signature 306 326 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 MobiDBLite consensus disorder prediction 354 375 - -
Adu03g03693 413 CDD AP2 265 326 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 ProSiteProfiles AP2/ERF domain profile. 160 230 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 MobiDBLite consensus disorder prediction 356 375 - -
Adu03g03693 413 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 371 - -
Adu03g03693 413 Pfam AP2 domain 266 316 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 Pfam AP2 domain 160 222 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 SUPERFAMILY DNA-binding domain 159 232 IPR016177 GO:0003677
Adu03g03693 413 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 117 371 - -
Adu03g03693 413 CDD AP2 159 232 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 ProSiteProfiles AP2/ERF domain profile. 266 324 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 SMART rav1_2 266 330 IPR001471 GO:0003700|GO:0006355
Adu03g03693 413 SMART rav1_2 160 236 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03693 Adu-Chr3 125325211 125328625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03693 96 367 AP2-EREBP Transcription Factor Family AT1G51190 65.108 1.92e-116 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu03g03693 AP2 1.4e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03693 K09285 - gmx:100777168 360.147