Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03660 ATGGCTCCGCCCCTGCTGGTTACCAAGGAGGAAGGGCTGAGCAACGCTTCAACTGTAGCCTCTGCATCTTCGCCACAATCCTTGGACTGCTTCTCCCAAAATGGAGGGGTTTCCTTGAAAGAACGCAACTACTTGGGTTTGTCCGATTGCTCATCAGTAGACAGTTCAGCTGCGCCTGGCATGTCTGATGAGAAAAAGGACAATCTGAATTTGAAGGCCACCGAGTTGAGGCTCGGCCTTCCTGGATCCCAATCTCCTGAAAGGGGTCCAGACATCTTCTCATTGAGCTCAACAAAGCTTGATGAGAAACCACTGTTCCCGTTGCTCCCGCTCCCTACGAAAGATCCGTGCTCATCAACTCAAAAGACTGTAGTTTCGGGAAACAAAAGGGGGTTTGCTGATGCAATGGATGGATTCCCCGAGTTTACTGGTACTGCTGCAATAAATGTGATGCTATCACCAAGACCTGCTGGACTGCAACCAACTGCAAAGAAGGAAATACAAAGCAAGGTATTACAAGGAGAGACCGGCGCAGTCAGTGGAACAGGAGGTGCTGTCGGCGGCAGTTCACCGGCTTCTAAGGCACAGGTTGTTGGTTGGCCTCCTATTAGATCATTTAGGAAAAACTCGTTGGCTACCACTTCAAAGAACAATGATGAAGTAGATGGAAAACCAAGCCCGGCGGTGCTCTTCGTGAAGGTGAGCATGGATGGTGCTCCATATCTGAGGAAGGTTGATCTGAGGAATTATACGACATACCAGGAATTGTCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTTATCTTAGGTCAGTGTGGTTCGCATGGGGCTCCAGGAAGAGAAATGATGAGTGAGAGCAAGCTGAAGGATCTCCTGCATGGTTCAGAATATGTACTTACTTATGAAGACAAAGATGGCGACTGGATGCTCGTAGGAGATGTGCCTTGGGAGATGTTCATTGACACATGCAAGAGGCTGAAAATCATGAAGGGTTCTGATGCCATTGGCTTAGCTCCCAGGGCTGTGGAAAAATCCAGGAGCAGGAGCTAG 1050 0.4895 MAPPLLVTKEEGLSNASTVASASSPQSLDCFSQNGGVSLKERNYLGLSDCSSVDSSAAPGMSDEKKDNLNLKATELRLGLPGSQSPERGPDIFSLSSTKLDEKPLFPLLPLPTKDPCSSTQKTVVSGNKRGFADAMDGFPEFTGTAAINVMLSPRPAGLQPTAKKEIQSKVLQGETGAVSGTGGAVGGSSPASKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPSPAVLFVKVSMDGAPYLRKVDLRNYTTYQELSSALEKMFSCFILGQCGSHGAPGREMMSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAVEKSRSRS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03660 349 SUPERFAMILY CAD & PB1 domains 227 330 - -
Adu03g03660 349 Pfam AUX/IAA family 74 340 IPR033389 -
Adu03g03660 349 ProSiteProfiles PB1 domain profile. 229 333 IPR000270 GO:0005515
Adu03g03660 349 PANTHER AUXIN-INDUCED PROTEIN 20 342 - -
Adu03g03660 349 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 342 IPR003311 GO:0005634|GO:0006355
Adu03g03660 349 MobiDBLite consensus disorder prediction 1 32 - -
Adu03g03660 349 MobiDBLite consensus disorder prediction 11 32 - -
Adu03g03660 349 Gene3D - 226 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03660 Adu-Chr3 124881386 124884210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03660 243 329 B3 DNA Binding Superfamily AT1G19220 32.184 4.42e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu03g03660 AUX_IAA 3.6e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03660 K14484 - gmx:100500373 520.39