Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03625 ATGCAAGAAGTGCAAGGCGAAATCGATCCTTCAACACCAGCATTAACCCCACTAGTATCATCATCGTCATCTCCATCCTCTAGTTCAAGCGAAGGCCTTCATAGATATCGAAGAAACAATCAAATAATATTTGAAGAATTTGAGATGAGTGATATGGGACTAATGTCTTATTATTTGGGAATTGAAGTGAAACAAATGGAGGATGGAATTTTCTTCTCACAAGAGGTTTATGTAAGAGAGCTATTGAAGAAACTCAACATGCTAGATTGCAATGCTACCAATACACCTGTAGAGTGTGGAGTCAAACTTTCCAAAGAGGAAGAAAGTATACTACTAAGGGAACTTCATTTTGAGCAAGCTAAATCCACCAAGATCATGATGGACAATAAGTCAGCAATTGCCCTAACAAAGAATCCAGTGTTTCACAACAGAAGCAAGCACATAGAAACAAAGTATCATTTCATTCGACAATGTATTGAGAACATGCATGTAGAGGTTGAGTATGTGAAATCACTTGATCAAGTTACTGACATTTTCACAAAACCTCTGAAATATGATGCTTTTCAAAGGTTAAGGATTATGATTGGAGTCGAAAAATTATCAAGTTTAAGGGAGAATGTTAAAAATAAACTTGATGAAATCAAGCCCAGTTATTCACCCTCTATTCCCTTTGGTGGCTACGGTGCATGGTTCTCTCTTCATATCATTGACGGCGCCGATCTCATCCATCCGACCATCCAAGCGGCGATCCCTCCTCAGGGAAGACAAGGCTCCCAATTCTTCATCCTTTCTCCCTCTTGGCGGCTACGGTGCATGGTTCGCTCTTGGTTACATCAACGGCGCCAACCTCCTCCATCGGACCATCCAAGCGCCGCTCCATTCTCAAGTGAAGTCTACGCTCCCGATTATTCACCCTATCTCCTTGTCGGTGGCTACGGTGTATGGTTCGCTCTTGGTTACATCAGTGGCGCTAACCTCCTCCAATCAACCATCCAAGAGAAGGGTGCGGTGCAACACTTCCGAAAGAGAGCATCTTCCATGACATTTTTAATCCCGGAAGGTGAATCGATTAGTACATTGATCAATCCAACCCAAGGCGATGAACAATTCAGTGTGGGTGAAGTAGTTATTCAAGAGCAAGAGGGGTCGAAGGTCGACGAAATTATCAACGTCGTTGTTACTAGAAAGGATGAGTTGGAATTGGGACACGAGTTACCGGATCATAGTGGGGTCGGTGAAGAGGAAATTCCAATCATAGGAATGAGTTTTGGTTCGTTGCCTCTCGCACAGAAGTTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATTAGGAACATGAATTTCGATAAGACACGGAAGGAATCAAAGATACCGGTTAATCAATCTATTTACTGCACGCGAGAATGTTATCGAGAGTCTAGGGTGAACGCAACAACTCGAGCAAACAGAACAGCCACGAGATGCAGAGCAAGGATGCATGGTTTGTCGTTTGCATCCTTTGTCGGTGTAAACCACCATGAAAAGTCTAGTCTTCTTGACTGTACTTTACTTGGGAGCGAGGAGATCCCTAGATTTGAGTGGGTGTTCATGCAGTTAGTTAGATGCGTTGGGGCTGCGCCAAGGAGGATAATCACTGACCAGTGCAAGGCGATGGCTGGTGCTATTAGGAATGTCCTACCTGATACTGTCCATTGA 1704 0.4325 MQEVQGEIDPSTPALTPLVSSSSSPSSSSSEGLHRYRRNNQIIFEEFEMSDMGLMSYYLGIEVKQMEDGIFFSQEVYVRELLKKLNMLDCNATNTPVECGVKLSKEEESILLRELHFEQAKSTKIMMDNKSAIALTKNPVFHNRSKHIETKYHFIRQCIENMHVEVEYVKSLDQVTDIFTKPLKYDAFQRLRIMIGVEKLSSLRENVKNKLDEIKPSYSPSIPFGGYGAWFSLHIIDGADLIHPTIQAAIPPQGRQGSQFFILSPSWRLRCMVRSWLHQRRQPPPSDHPSAAPFSSEVYAPDYSPYLLVGGYGVWFALGYISGANLLQSTIQEKGAVQHFRKRASSMTFLIPEGESISTLINPTQGDEQFSVGEVVIQEQEGSKVDEIINVVVTRKDELELGHELPDHSGVGEEEIPIIGMSFGSLPLAQKFYANYAKKVGFVTKIRNMNFDKTRKESKIPVNQSIYCTRECYRESRVNATTRANRTATRCRARMHGLSFASFVGVNHHEKSSLLDCTLLGSEEIPRFEWVFMQLVRCVGAAPRRIITDQCKAMAGAIRNVLPDTVH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03625 567 PANTHER GAG-POL-RELATED RETROTRANSPOSON 104 197 - -
Adu03g03625 567 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 43 97 IPR013103 -
Adu03g03625 567 MobiDBLite consensus disorder prediction 1 33 - -
Adu03g03625 567 PANTHER - 104 197 - -
Adu03g03625 567 CDD RNase_HI_RT_Ty1 111 183 - -
Adu03g03625 567 Pfam MULE transposase domain 498 567 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03625 Adu-Chr3 124340485 124345714 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g03625 MULE 1e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03625 - - adu:110274824 258.84