Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03624 ATGCCCTTGGAAGGGGTTTTCATTCAACCACCCTCTACTTCTGCTTCTGCTTCTGCTTCTGCTTCTACTACTTGTGTTCCTGATCTTTCCCTTCACATAAGCCCTCCAACCACCACTAACTATGCCGGAGGACATCACACCGACCTCTCTCTTGGGAGACGAGAACCACCACCACCACCACCATTACTGCCGACTAACATGAACCACATAAACGAAGCCTTGAGACCCATCAAAGGGATCCCGGTTTATCACAACCGTTCTTTCCCTTTCTTACCCATGGATAGGGATCACAACAATCCAAATCCCAAGATGTGCTTATATCATCACATGCCTGCATCTTCTTCTCCTTTCCCTGTGGGAGTGGGTTTAGATCCCATTTCCTTCTTGAATTCCGGGGGAGCGGGAGGGCCTTATAATAATAGGGCTGCTGCCACAACTAGGTTCAATAATGGGATCCCAAGCCATCAGCACCATCCATTGCACCACCACTACGGCTCGTCGGAGATGATGAGATCAAGGTTCTTGCCTAAGCTCCCAAGCAAGAGGAGCATGAGAGCACCCAGGATGCGGTGGACTAGCACCCTCCATGCTCGATTTGTTCACGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCAACACCCAAGTCCGTACTTGAGTTGATGGATGTGAAAGATCTCACATTAGCCCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACTACTGACAAGCCTGCAGCTTCTTCCGGGCTTTCGGATGGATCAGGAGAGGATGAAATGTCTCCTCCAATGGGAAGTAGTGGTATGCGTCAATTTCAAGAGCAAAGAGGCCAACAAGATATGGATTATTCTTCCACCCCAACACTATGGAGTAATAATTCTTCAAGCAATAGGGACCCATGGCCACAAGCTAATTCAAACGACATAGATGGTTTCAGACCAATATCAATGTTTCAGTCTCAATCCATAGGCCATCAAATCCAGCAGGCGTGTGATTCAACCCAAATCAAGAGCAGTTTGTCAGGATCTAATAATAATTTAGAGTGCAAGAACCCAAGTTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1116 0.4722 MPLEGVFIQPPSTSASASASASTTCVPDLSLHISPPTTTNYAGGHHTDLSLGRREPPPPPPLLPTNMNHINEALRPIKGIPVYHNRSFPFLPMDRDHNNPNPKMCLYHHMPASSSPFPVGVGLDPISFLNSGGAGGPYNNRAAATTRFNNGIPSHQHHPLHHHYGSSEMMRSRFLPKLPSKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDEMSPPMGSSGMRQFQEQRGQQDMDYSSTPTLWSNNSSSNRDPWPQANSNDIDGFRPISMFQSQSIGHQIQQACDSTQIKSSLSGSNNNLECKNPSLEFTLGRPDWNGKGQA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03624 371 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 149 371 IPR044847 GO:0000976|GO:0006355|GO:0010158
Adu03g03624 371 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 71 143 IPR044847 GO:0000976|GO:0006355|GO:0010158
Adu03g03624 371 SUPERFAMILY Homeodomain-like 184 240 IPR009057 -
Adu03g03624 371 MobiDBLite consensus disorder prediction 33 62 - -
Adu03g03624 371 Gene3D - 186 243 - -
Adu03g03624 371 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 149 371 - -
Adu03g03624 371 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 71 143 - -
Adu03g03624 371 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 187 240 IPR006447 GO:0003677
Adu03g03624 371 MobiDBLite consensus disorder prediction 268 312 - -
Adu03g03624 371 MobiDBLite consensus disorder prediction 242 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03624 Adu-Chr3 124323970 124327829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03624 1 368 G2-like Transcription Factor Family AT5G16560 43.304 1.51e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu03g03624 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03624 - - adu:107481025 731.095